Pairwise Alignments

Query, 599 a.a., PAS fold. from Pseudomonas stutzeri RCH2

Subject, 1099 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors from Synechococcus elongatus PCC 7942

 Score = 50.1 bits (118), Expect = 5e-10
 Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 5/145 (3%)

Query: 337 QAVQARLRLSQQVGLFGDWQFDLTSQRLDLSDQALQLLGM-PSGAAAG-EALLERLHPQD 394
           ++++ +L  +Q+V   G W F++ +Q ++ S Q  +L GM PS      E  L+++HP D
Sbjct: 473 ESIRDQLETAQRVAKVGSWAFEVVTQTIEWSPQLFRLFGMNPSEPVPSFEEHLQQIHPLD 532

Query: 395 RLGFVAAMLDLAEGQTGFDARVRLSGTAAEDWRHF-HFAGTVIRTKAHPAGLLVGCLQDV 453
           R  ++  +    +  T +    R+  T A+   H+    G  +R        L+G   D+
Sbjct: 533 RDYWLRNVQRCIQQGTPYSIDFRV--TWADGSIHWVSGQGEAVRNAEGQVVRLIGSAIDI 590

Query: 454 TEQQRREARLEDAEAFTRGIIDALP 478
           T+++  E RL  AE   R +I+  P
Sbjct: 591 TDRKATELRLAQAEEQARLLIEKNP 615