Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 453 a.a., Sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score =  126 bits (317), Expect = 2e-33
 Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 10/220 (4%)

Query: 461 ANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHLQRLIR-RQAGDSEFERLS 519
           A+++LQ L+QR++ +QE ER  V+R+LHD + Q L  +K   +      + G      + 
Sbjct: 231 ADKKLQRLNQRIVSLQEEERSRVSRELHDGISQLLVSIKFQFELASHVLENGQENGLGIL 290

Query: 520 QPLVASMDAALAKVRSLSLSLHPLQLETLGLEAAVRWHLQHFLEASGTCWELEVRGSTTE 579
           +     +  A+ ++RS+S  L    L+TLGL AA+      F + SG    LEV   + E
Sbjct: 291 KNATDRLGEAIGEIRSISHDLRSSLLDTLGLPAAIGQLATEFQQRSG----LEVSYRSNE 346

Query: 580 ----IPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELRLEILDDGRGFDVPEA 635
               +  G  V+ FR+ QEA+ N+ RHA A++V I +      LRL ++DDG GF+VP+ 
Sbjct: 347 FDCRLENGAPVSLFRIAQEALTNIERHAGAKSVGITLFGSSQSLRLTVVDDGMGFNVPQV 406

Query: 636 LQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALLP 675
            +G   +GL ++ ERV  FGG L ++S PG  + +  LLP
Sbjct: 407 ERGHAGIGLRNIRERVEHFGGRLEVTSAPGR-SELDILLP 445