Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 490 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score = 82.4 bits (202), Expect = 5e-20
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 12/227 (5%)

Query: 448 VSQAEQLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLT--GLKLHLQRL 505
           ++Q E LR  L  A+QR   L++ L+       R +  DLHD   Q +    L+L   +L
Sbjct: 264 LAQNEALRARLRQASQRATALNETLL-------RRIGADLHDGPAQLVAYASLRLDSNKL 316

Query: 506 IRRQAGDSEFERLSQPLVASMDAALAKVRSLSLSLHPLQLETLGLEAAVRWHLQHFLEAS 565
           +         ER    +  S+D A+ ++R+L   L   Q+ET  L   +   ++   + +
Sbjct: 317 VSPSTPAELREREIAAIKGSLDEAMNEIRTLCNGLVLPQIETASLREILERCVRAHEQRT 376

Query: 566 GTCWELEVRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELRLEILD 625
           GT  +L +      +     +  +R VQEA+NN  RH      R+    +  ++ +E+ D
Sbjct: 377 GTTVDLSMSDPPERLSASAKICIYRFVQEALNNAFRHGGGIAQRVTQNTNGDKITVEVAD 436

Query: 626 DGRGFDVPEALQGAQSLGLTSMHERVASFGGDLRIS-SLPGMGTRIT 671
            G GFD  E      SLGL  +  RV S GG   I+ + PG   R++
Sbjct: 437 GGPGFDPSEV--RPTSLGLAGLKGRVESLGGTFEINPNAPGTIVRMS 481