Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 677 a.a., histidine kinase from Herbaspirillum seropedicae SmR1

 Score =  120 bits (300), Expect = 3e-31
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 1/223 (0%)

Query: 453 QLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHLQRLIRRQAGD 512
           QL + +      L+ L+  L  V+E E+R +AR+LHD++G  LT L +HL+ + +    D
Sbjct: 446 QLEKTVIQRTALLRELTNHLETVREEEKRAIARELHDNMGASLTALSMHLEGVYQILPPD 505

Query: 513 SEFERLSQPLVASMDAALAKVRSLSLSLHPLQLETLGLEAAVRWHLQHFLEASGTCWELE 572
            ++      +   M + +A  R +   L P  L+  GL+AA+   L    E +G      
Sbjct: 506 EKWADRKVRMQGLMKSLVATTRRIQTELRPNTLDLFGLKAAISEQLDELHERTGIACHAS 565

Query: 573 VRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELRLEILDDGRGFDV 632
           +     E+     +A +R++QE +NNV +HA+A  V +++  DE  + L + DDG G   
Sbjct: 566 LPDEDVEVGHEMEIAIYRMLQEMLNNVTKHAKASKVDVILDIDEDHVALTVRDDGVGIP- 624

Query: 633 PEALQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALLP 675
            E     ++ GL  + ER   FGG++ I S PG G  IT  LP
Sbjct: 625 EERRDNHKTYGLRGLRERATFFGGEVDIRSTPGKGALITISLP 667