Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 370 a.a., histidine kinase from Burkholderia phytofirmans PsJN

 Score =  129 bits (323), Expect = 3e-34
 Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 19/241 (7%)

Query: 444 LIRDVSQAEQLRRDLEDANQRLQHLSQRLIEVQ---EIERREVARDLHDDVGQHLTGLK- 499
           + RD+++    RR LED    L+H S     VQ   E E+R +AR+LHDD+GQ +T LK 
Sbjct: 130 ITRDMTE----RRRLED----LEHASAASALVQQARENEQRRIARELHDDLGQQITALKM 181

Query: 500 ---LHLQRLIRR--QAGDSEFERLSQPLVASMDAALAKVRSLSLSLHPLQLETLGLEAAV 554
              LH   L R   +AG +    + + +   +DA    +R ++  L P  L+ LGLEAA+
Sbjct: 182 TLALHETELARHFSEAGRARLGSVRE-MADQLDAMATSMRRIAADLRPPMLDDLGLEAAL 240

Query: 555 RWHLQHFLEASGTCWELEVRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVC 614
            W  + F +  G     E+      +    A++ +R++QEA+ NVARHARA  V + +  
Sbjct: 241 EWMTEGFEQRYGVPVRCEISPDVLCLNDLAAISLYRVIQEALTNVARHARANEVFVTLSA 300

Query: 615 DEHELRLEILDDGRGFDVPEALQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALL 674
           D+    L+I DDG G     A + A   GL  M ER++  GG L + S+PG G  ITA +
Sbjct: 301 DDRHYHLQIHDDGVGLPKAPAPR-ADCFGLLGMRERISQLGGVLSVDSIPGRGVTITARV 359

Query: 675 P 675
           P
Sbjct: 360 P 360