Pairwise Alignments

Query, 361 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 17/204 (8%)

Query: 91  VGELFSRFAGMTQRLQQTLNTSEAVVGGNGMASSLRHARDQLNVVTGAFHTASERKAALL 150
           V E   R A   Q   Q         G  G++     ARD  ++        +++ A+ +
Sbjct: 544 VSEFAQRAATFVQEANQK--------GHGGVSVGNELARDMTSI--------NQQMASAV 587

Query: 151 GTIGELNQHASELQNMSRLVQDIARQTNLLALNAAIEAARAGDYGRGFSVVADEVRKLST 210
             I  LN  +  + ++  ++Q IA QTNLLALNAAIEAARAG+ GRGF+VVADEVR L+ 
Sbjct: 588 EAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAA 647

Query: 211 LSAETGHDMDQKVGEINQAISATVSAAEELSNTEQSNLHYLDEVTGEVMQGLSASLEELA 270
            +  +  ++  K+  + +   + V+  EE +NT    +      T ++++ +   L EL 
Sbjct: 648 KTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNT-DMLKQIVDMLNELN 706

Query: 271 DTSLLLQQDTRHTQADIEEIVVNL 294
           + ++ +   T   +   EEI  N+
Sbjct: 707 EMNIQIATATEQQRGVTEEINANI 730



 Score = 24.6 bits (52), Expect = 0.009
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 165 NMSRLVQDIARQTNLLALNAAIEAARAGDYGRGFSVVADEVRKLSTLSAETGHDMDQKVG 224
           N   L Q +     L  +N  I+ A A +  RG   V +E+    T  ++    +  +VG
Sbjct: 691 NTDMLKQIVDMLNELNEMN--IQIATATEQQRG---VTEEINANITSISDVSASVTVQVG 745

Query: 225 EINQAISATVSAAEELS 241
           E+N  ++     A ELS
Sbjct: 746 EVNAIVNELSDEAMELS 762