Pairwise Alignments

Query, 361 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 15/216 (6%)

Query: 81  DQVRQV--QQGSVGELFSRFAGMTQRLQQTLN-----TSEAVVGGNGMASSLRHARDQLN 133
           D++ QV  Q     E     A   Q++  T++     T+ AV G N  A +    R  + 
Sbjct: 325 DELEQVIEQFNVQSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVV 384

Query: 134 VVTGAFHTASERKAALLGTIGELNQHASELQNMSRLVQDIARQTNLLALNAAIEAARAGD 193
                    S        +IG LN    ++     ++Q IA QTNLLALNAAIEAARAG+
Sbjct: 385 TTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGE 444

Query: 194 YGRGFSVVADEVRKLSTLSAETGHDMDQKVGEINQAISATVSAAEELSNTEQSNLHYLDE 253
            GRGF+VVADEVR L+T + ++  ++ + V  I   +S  V   +  +N  Q  L     
Sbjct: 445 QGRGFAVVADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETL----- 499

Query: 254 VTGEVMQGLSASLEELADTSLLLQQDTRHTQADIEE 289
                 + L  SL+++      +Q +++   A IEE
Sbjct: 500 ---SASRQLDESLQQILRDMHTIQDNSQRIAAAIEE 532