Pairwise Alignments

Query, 361 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 21/205 (10%)

Query: 163 LQNMSRLVQDIARQTNLLALNAAIEAARAGDYGRGFSVVADEVRKLSTLSAETGHDMDQK 222
           L  ++ ++  IA +TNLLALNAAIEAAR+G+ GRGF+VVADEVR L+  + E    + ++
Sbjct: 191 LNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRAGEAASQISEE 250

Query: 223 VGEINQAISATVSAAEELSNTEQSNLHYLDEVTGEVMQGLS---ASLEELAD---TSLLL 276
           +    +++ A V+   E++N E S  +   ++  E +Q L    +S+ EL++   T ++L
Sbjct: 251 I----ESLRAEVTQRFEVANKESSEQNIKADMMIESVQSLRQSFSSVRELSERQITQIML 306

Query: 277 QQDTRHTQADIEEIVVNLQFQDRTDQMLDHLQQDMQRLHEAVDRQDSAV---------LD 327
             +    + +I   +   QFQD   Q LD ++  M+  H  V    + +         L+
Sbjct: 307 YNN--DLEKNISGSMACTQFQDIVRQKLDSIEALMREKHLLVGDVFNGMRLNDLRHRELE 364

Query: 328 PHRWLRELRQRFTTDEERHGVKRSS 352
               LR L   +  D ERH   R S
Sbjct: 365 YTETLRRLSLEYRHDFERHCNYRDS 389