Pairwise Alignments

Query, 361 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 412 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score = 97.1 bits (240), Expect = 8e-25
 Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 19/240 (7%)

Query: 78  SNVDQVRQVQQGSVGELFSRFAGMTQR-LQQTLNTSEAVVGGNGMASSLRHARDQLNVVT 136
           SN+ Q   +Q    G + +    M Q  L     T   VV  N     ++       V  
Sbjct: 124 SNMTQKVSLQNQVSGAIETDMESMWQACLHVQAMTERIVVASNASDDKVKQGMSTTQVAL 183

Query: 137 GAFHTASERKAALLGTIGELNQHASELQNMSRLVQDIARQTNLLALNAAIEAARAGDYGR 196
            +FH  ++R       + +L Q +  +  +  ++  I++QTNLLALNAAIEAARAG+ GR
Sbjct: 184 TSFHDLTKRLEKAFAEVEQLKQSSDRIGGILEVINSISQQTNLLALNAAIEAARAGEAGR 243

Query: 197 GFSVVADEVRKLSTLSAETGHDMDQKVGEINQAISATVSAAEELSNTEQSNLHYLDEVTG 256
           GF+VVADEVR L+  +AE+ H++     EI +A+S       E S+ E S       VT 
Sbjct: 244 GFAVVADEVRSLAGRTAESTHEVRAITDEILRAVSMLSQHIHE-SHNELS-------VTQ 295

Query: 257 EVMQGLSASLEELADTSLLLQQDTRHTQADIEEIVVNLQFQDRTDQMLDHLQQDMQRLHE 316
           + + G+  SL  +A+      Q+T    A+I + +      +   +   H++Q +  L E
Sbjct: 296 QQIDGVEVSLSGIAEA----VQETNGAVAEISQAI------EEQTRAAKHVRQSIDGLQE 345