Pairwise Alignments

Query, 748 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (650), Expect = 9e-72
 Identities = 145/390 (37%), Positives = 228/390 (58%), Gaps = 11/390 (2%)

Query: 332 KRNQEHSQIRVAAHKLDELINLVGELVISAAGAQLRAQLKGDAACIESTQTVNLHVEQIR 391
           K+ Q  S +RV    LD ++N+VGELV+             D    ++   +++    ++
Sbjct: 390 KKAQTESTVRVDTSTLDTIMNMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQ 449

Query: 392 EAALKLRMIEIGDTFNRFHRVVRDVSQQLGKDIRLEIQGADTELDKAVIDRLADPLTHLV 451
            A +K RM  I   F RF RVVRD+++ L K+I LE++G +T+LDK +++ LADPL HLV
Sbjct: 450 GAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLV 509

Query: 452 RNAIDHGIEPAEQRLAAGKPAEGHLRLDAYHESGMIVIEVADDGRGLNTQRIREKAIARG 511
           RN++DHGIE  ++R   GK   G + L A  E   I + + DDG G++  ++R  A+ RG
Sbjct: 510 RNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRG 569

Query: 512 LIDAQA--NLSDHDVQMLIFAAGFSTADNVSDLSGRGVGMDVVRSAIDALRGTIEIDSRP 569
           ++D  A   L++ +   LIF  GFS+ + ++D+SGRGVGMDVV++AI+ L G+I+IDS  
Sbjct: 570 IMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTM 629

Query: 570 GAGCTFRIRLPLTLAIIDGFLISLGDDYFVIPLDMVTECLELE---ADQLDGAAYGYLDL 626
           G G    I++PLTLAI+   ++ +    F +PL  V E   L+    + +DG     + +
Sbjct: 630 GKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQL--TIIV 687

Query: 627 RGRPLPCLSLAAHFKLREAPSKRR----NIIVVSHGRQQAGLIVDHLHGELQTVIKPLGQ 682
           R + +P   L      ++   + R    ++++V  G Q+ GL+VD L G+ + VIKPL +
Sbjct: 688 REKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDK 747

Query: 683 LFQHLQGIGGSTILGSGQVALILDIPSLFR 712
           L Q   G+ G+TI   G +ALILD+P L +
Sbjct: 748 LLQGTPGMSGATITSDGHIALILDVPDLLK 777



 Score = 77.4 bits (189), Expect = 3e-18
 Identities = 37/108 (34%), Positives = 60/108 (55%)

Query: 10  LLLSFVEEARDLAKQAEEYLLQLEQTPTDEDAINGLFRAMHTLKGSAGLFSLTPLVNFTH 69
           +L  F+ EA ++ +   E L++LE  P D D +N +FR  HT+KG AG  +L+ LV   H
Sbjct: 9   ILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVETCH 68

Query: 70  HLESLLMKVREGQQALTPVLLDLLLRGLDEINAMVELIDADSGELPVD 117
             E++   +R GQ+ ++P L+D +L+ LD +N     +       P D
Sbjct: 69  GAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPAD 116