Pairwise Alignments

Query, 748 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2

Subject, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  300 bits (767), Expect = 2e-85
 Identities = 226/768 (29%), Positives = 384/768 (50%), Gaps = 76/768 (9%)

Query: 10  LLLSFVEEARDLAKQAEEYLLQLEQTPTDEDAINGLFRAMHTLKGSAGLF-SLTPLVNFT 68
           ++ +F+ E+RDL + A   LL LE  P D+  IN LFR +HT+KG++G+  ++ P     
Sbjct: 4   IMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLA 63

Query: 69  HHLESLLMKVREGQQALTPVLLDLLLRGLDEINAMVELIDADSGELPVDE--------AR 120
           H +E L+ KVR+G  AL   +LDL+L   D+    +E ++    EL  +         A+
Sbjct: 64  HRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQ-ELSAEAVSISKQMIAQ 122

Query: 121 HAGLIAALTSHEVSPLIPL-----TVIEPDACKAFGRLDKCANCDQEAAWHISLRL---- 171
            A L  A  +H  +P +       T+   +  +  GR   C N  +    H    L    
Sbjct: 123 LAPLTQAAPTHTPTPAVAAQEETATLSISELTELLGR--DCFNDVEALLEHPDALLLIYT 180

Query: 172 -QPEILANGFDPASFLRYLSRLGDILQLELIDDALPALADIDPESCYLGMEIDLCTTASK 230
              +   +G DP +++R + ++    ++ LI D+ P       ++    M+  L T ++K
Sbjct: 181 PDKQCFFSGDDPLAWMRSVEKVS-WRKVVLIPDSEPF------DTYQAQMQFLLLTQSAK 233

Query: 231 AEIEEVFEFIR-EFCTLRILP---PNAALEDYLQLIHDLPET------DQKIGRILVASG 280
            ++E+    I  ++   RI     P A ++   Q +  + +       ++++   + A  
Sbjct: 234 KDLEQQLAPIEGQYRLYRIQSDNLPTAPIDQRTQYVERIVKQQIALLREEQVSESVRAGT 293

Query: 281 LLTELELDQALRLQAADAQQPRPLGSVLVEQGMVPAQGVNAALAKQQTVREKRNQEHSQ- 339
            L+   L  AL  Q +D   P P  SV  ++ +     +  + A +  + +K   E +Q 
Sbjct: 294 FLSIKNLYCALSQQISDRPAPLP-ESVSADELITLFDNILLSFAHRTAIIDKCENEPAQP 352

Query: 340 -------------------IRVAAHKLDELINLVGELVISAAGAQLRAQ-------LKGD 373
                              ++V   K+D L++LVGEL+++    Q  A        ++  
Sbjct: 353 SAITVNEQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKL 412

Query: 374 AACIESTQTVNLHV-EQIREAALKLRMIEIGDTFNRFHRVVRDVSQQLGKDIRLEIQGAD 432
           A  I++ Q+V   + E ++   +++RM+ +   F R+ R++RD+S++LGK + L I+G D
Sbjct: 413 AQDIKAEQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGED 472

Query: 433 TELDKAVIDRLADPLTHLVRNAIDHGIEPAEQRLAAGKPAEGHLRLDAYHESGMIVIEVA 492
           TE DK++++ L++PL HL+RNA+DHGIE  + R   GK   G + L A+     ++I+++
Sbjct: 473 TEADKSIVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMS 532

Query: 493 DDGRGLNTQRIREKAIARGLIDAQ--ANLSDHDVQMLIFAAGFSTADNVSDLSGRGVGMD 550
           DDG+G++ +R++ KA+ RGL++A     +S  ++  LIF  GFST + VSDLSGRGVGMD
Sbjct: 533 DDGKGVDVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMD 592

Query: 551 VVRSAIDALRGTIEIDSRPGAGCTFRIRLPLTLAIIDGFLISLGDDYFVIPLDMVTECLE 610
            VR+AI+   GT+ + S PG G    + LPL++ I    +  L    F IP++ V + L+
Sbjct: 593 AVRTAIERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLK 652

Query: 611 LEADQLDGAAYGYLD---LRGRPLPCLSLAAHFKLREAP--SKRRNIIVVSHGRQQAGLI 665
           +   + D      LD   LRG  +P L L   F++  A      + I+VV  G    GL 
Sbjct: 653 ISRHK-DIRRVKNLDTFILRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLA 711

Query: 666 VDHLHGELQTVIKPLGQLFQHLQGIGGSTILGSGQVALILDIPSLFRH 713
           VD L      +IKPL           G+ I+G G+V L+LD   + +H
Sbjct: 712 VDRLQEGQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKH 759