Pairwise Alignments

Query, 548 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 611 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  305 bits (781), Expect = 3e-87
 Identities = 205/578 (35%), Positives = 324/578 (56%), Gaps = 64/578 (11%)

Query: 9   IGARLTLGFLLVVLLTIAVGLLGIRNLSEVSGLSDLMYERDLTGIDAVHSANYSLIVAGR 68
           I  +L L F ++VLL++A   LGI+ +  ++     M +  +  I         L+   R
Sbjct: 5   IKIKLALTFAVIVLLSMATAGLGIQKMGALNESFVAMVDGPVRQIQRAQELFSDLLTVSR 64

Query: 69  ALRGSLLATTVEA---RDSSAAAAQKALVDTRTTLEKAKKSFHSDQAKALVNRIDEPLAD 125
           + +  L+A T E     +      QK L   R  LE+      +D  +  V+   +   +
Sbjct: 65  SEKSLLVADTPELIAMYEQRIIKEQKVLDGHRLKLEENA----TDVNRQNVDIFSDLWRE 120

Query: 126 YERRLNEILSIHLASAELAEQSAFSELFPALSRSG-----ETVDNLMSEAVAFRRDRAQE 180
           Y     +I++  LA  + A ++A       LSR       E VD  + + +A  +    +
Sbjct: 121 YAAVQGKIIA--LAKDDRAGEAA------TLSRGQGRQILERVDATLVDLIADEQKSMDQ 172

Query: 181 ANAQINAIYLGSKTQMIGLILLAVVLGFIIGMLVTRSITRPLNRAVSVADSLAAGDLGVQ 240
             A     Y  ++  ++G+I  ++++  +    ++ SI+R L  A+ +A++++ GDL   
Sbjct: 173 TQADALRQYESARLLLLGVIAASLLIAVVAATWISLSISRGLRSAIGLAEAVSIGDLDQT 232

Query: 241 LEVNSKDETGRLLSSMNNMA---------------------------------------E 261
           +   + DE   ++ S+N M                                        E
Sbjct: 233 VSAKTNDEIKDMVDSLNKMTANLRETAAVADAVAGGDLTVEAKPLSDKDTLGMALKRMVE 292

Query: 262 RLRNVISDVRSAADSLSSASEEVSATSQSLSQAASEQAASVEETTASVEQMSASIAQNTE 321
           +LR V+ +  SAA+++SS S+E+SAT++ LSQ A+EQA+S EE +AS+E+M+A+I QN +
Sbjct: 293 KLREVVGEANSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEEMAANIKQNAD 352

Query: 322 SAKITDNIAGKAANDAVEGGRAVRDMVQAMKQIADKIGIIDDIAYQTNLLALNAAIEAAR 381
           +A  T+ IA +++ DA   G AV   V AM+ IA+KI I+ +IA QT+LLALNAA+EAAR
Sbjct: 353 NASQTEKIARQSSLDAQASGEAVTRAVSAMRTIAEKITIVQEIARQTDLLALNAAVEAAR 412

Query: 382 AGDHGKGFAVVAAEVRKLAERSQVAAQEIGGVASNSVQLAEQAGSLLDEIVPNIQKTSDL 441
           AG+HG+GFAVVA+EVRKLAERSQ AA EI  ++S +V+ A++AG +L  +VP+I+KT++L
Sbjct: 413 AGEHGRGFAVVASEVRKLAERSQTAAAEISTMSSQTVRAAQEAGDMLGRLVPDIRKTAEL 472

Query: 442 VQEITAASQEQSSGAEQINIAMGQMNQITQQNASASEELAATSEEMNAQAGQLLELISFF 501
           V EI+AA +EQ  G +QIN A+ Q++++TQQNASASEE++ATSEE+ AQ+ QL   I +F
Sbjct: 473 VSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELAAQSEQLQASIPYF 532

Query: 502 RFDAANTASQPL-RRPVPFASPRPAATSPRGEQRARTS 538
           R D A + S+P+  RP    + RPA     G + A  S
Sbjct: 533 RLDGAGSNSRPIATRP----TTRPAHAPTTGRKLAALS 566