Pairwise Alignments

Query, 165 a.a., Chemotaxis signal transduction protein from Pseudomonas stutzeri RCH2

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 6/159 (3%)

Query: 2   NQIASVEHSIQHLSFRVRQARYALPIELVREIIEYGQITSVPMMPACIHGVINLRGNVVP 61
           N++   E+  Q+++F +    +AL ++ V EII      SVP+ P+ + G+ NLRG ++P
Sbjct: 9   NELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILP 68

Query: 62  VLDLAARFGMERTAAGKRTCIVIIELELNEVQQRIGLVVDAVDAVLDIEGHEVEPAPPFG 121
           VL L     M+RT+A + T +++I +     + +IG  VD V  V   +   ++P    G
Sbjct: 69  VLCLRTLLCMDRTSATEATRVIVITIG----KTKIGFTVDRVVNVATPDPEMIKPTNTAG 124

Query: 122 SGIRTDFIAGMARNEQGFTIILDVRRVL--SLDDILQLN 158
             I    I     ++     +L+  R+L  S+++ L+L+
Sbjct: 125 GKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEELELS 163



 Score = 63.2 bits (152), Expect = 7e-15
 Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 5/109 (4%)

Query: 11  IQHLSFRVRQARYALPIELVREIIEYGQ-ITSVPMMPACIHGVINLRGNVVPVLDLAARF 69
           +Q + F++ +  + + I  V+EII   + I+ VP     I GVINLRGNV+P++D+  RF
Sbjct: 369 MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRF 428

Query: 70  GMERTAAGKRTCIVIIELELNEVQQRIGLVVDAVDAVLDIEGHEVEPAP 118
            +   A  +R  I+++  E    +   G +VD+V  VL I   ++E AP
Sbjct: 429 HLPEMARHERQRILVVNFE----KISTGFIVDSVSEVLRIPESQLEDAP 473



 Score = 62.8 bits (151), Expect = 9e-15
 Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 8/137 (5%)

Query: 23  YALPIELVREIIEYGQI-TSVPMMPACIHGVINLRGNVVPVLDLAARFGMERTAAGKRTC 81
           YA P+E  +EI+   +I T VP+  + I GVINLRG  +P++ L   FG+   +      
Sbjct: 203 YAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSISFSDSHR 262

Query: 82  IVIIELELNEVQQ-RIGLVVDAVDAVLDIEGHEVEPAPPFGSGIRTDFIAGMARNEQGFT 140
           ++++ + L+E ++  +G+VVDAV  V+ +    ++  P   S +      G A +     
Sbjct: 263 VLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKM------GQANDISAIC 316

Query: 141 IILDVRRVLSLDDILQL 157
            + D RR LS+  + QL
Sbjct: 317 NLDDGRRTLSVISVEQL 333