Pairwise Alignments

Query, 165 a.a., Chemotaxis signal transduction protein from Pseudomonas stutzeri RCH2

Subject, 178 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  128 bits (321), Expect = 6e-35
 Identities = 69/165 (41%), Positives = 103/165 (62%), Gaps = 6/165 (3%)

Query: 1   MNQIA------SVEHSIQHLSFRVRQARYALPIELVREIIEYGQITSVPMMPACIHGVIN 54
           MNQ+       SV    Q+L+F+     +A+ I  V+EIIE   IT VPMMP  + G+IN
Sbjct: 1   MNQLVNVGMTNSVGDITQYLTFQSANDTFAIGILDVKEIIEIEGITRVPMMPEFLCGIIN 60

Query: 55  LRGNVVPVLDLAARFGMERTAAGKRTCIVIIELELNEVQQRIGLVVDAVDAVLDIEGHEV 114
           LRG VVPV+DL+ R G   T   K++CIV++E+   + +Q IG++VD V+ +L+I+    
Sbjct: 61  LRGKVVPVIDLSKRLGRLTTVISKKSCIVLVEVSHEDERQTIGMLVDEVNEILEIDDEHT 120

Query: 115 EPAPPFGSGIRTDFIAGMARNEQGFTIILDVRRVLSLDDILQLNR 159
           +P P FG+ +R DFI  M R  + F I+LD+  VLS+ DI  +++
Sbjct: 121 QPPPDFGADLRVDFIRAMGRVGEHFMILLDINYVLSVADISAISQ 165