Pairwise Alignments

Query, 300 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

Subject, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  135 bits (341), Expect = 9e-37
 Identities = 94/269 (34%), Positives = 140/269 (52%), Gaps = 19/269 (7%)

Query: 5   LPPLNALRAFESAARLGSVSEAARELHVTHGAVSRQVRQLEEQLGITLFVKDGRGVKLTD 64
           LPPLNALRAFESAARL S++ A++ELHVTHGA+S+Q+R LE+ LG  LFV+  + V+LTD
Sbjct: 5   LPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKVELTD 64

Query: 65  AGGRLREAASEAFERLRSTCAELQRQ-TAEAPFVLGCPGSLLARWFIPRLDRLNRDLPEL 123
              R       A + L S  A+L+ Q +      +    SL   W IPR+++     P L
Sbjct: 65  EAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRYPHL 124

Query: 124 RLQLSASEGELDPRKPGLDATLWYAEPPWPADMQVFELAAERIGPVLSPYHPRCAELRSA 183
            + LS  +  +D  +   D  +  +    P  +   +L  E +  V +P          A
Sbjct: 125 YVDLSIGDFAVDFSQGRYDIAI-RSSTKLPKGVNYIKLMDEDLCLVCAP--------SLA 175

Query: 184 PPKALLEE----ALLHTASRPQAWPTWASQQQLDPTRLRLGQSF--EHLYFLLEAALAGL 237
           P    +E+     LL   +RP+ W  WA +  L  T+    Q+F  EH Y L +AA +G+
Sbjct: 176 PKLQCIEDINHVTLLKHTTRPELWDYWAEKVGLVLTQ---EQTFGVEHFYMLSQAAASGM 232

Query: 238 GVAIAPQQLVADDLKSGRLLAPWGFVETS 266
           G A+ P+  + + L +G L+ P+    TS
Sbjct: 233 GAALIPRFFIEEQLANGSLVIPFHSTFTS 261