Pairwise Alignments

Query, 296 a.a., Geranylgeranyl pyrophosphate synthase from Pseudomonas stutzeri RCH2

Subject, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

 Score =  132 bits (331), Expect = 1e-35
 Identities = 88/227 (38%), Positives = 123/227 (54%), Gaps = 9/227 (3%)

Query: 31  RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMD 90
           +LY A ++ ++ GGKRVRP L          +       A +VELIH Y+LVHDD+  MD
Sbjct: 24  KLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDI--MD 81

Query: 91  DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQAAHNPQDATLRLRMFAVLARAAG 150
           +DD RRG PT H  + E  AILAGD L + AFEA++    N +D+     +  VL++A  
Sbjct: 82  NDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALS----NIEDSNKAHEVLKVLSKAC- 136

Query: 151 PAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADNLASLSQ 210
              +  GQ  D+         D    M   KTGALI A V++GA+ +     +  A L  
Sbjct: 137 -VEVCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMADCTPEEREA-LCN 194

Query: 211 YARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMD 257
           YA+ IG+ FQ+QDD+LD+  D  T+GK  G+DI   K T   +  M+
Sbjct: 195 YAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAME 241