Pairwise Alignments

Query, 1056 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Pseudomonas stutzeri RCH2

Subject, 1046 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella sp. ANA-3

 Score = 1254 bits (3246), Expect = 0.0
 Identities = 626/1051 (59%), Positives = 809/1051 (76%), Gaps = 6/1051 (0%)

Query: 1    MFERIIRFSIEHRWLVMLAVLGMAALGAYSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M +++I+FSI  RWLVM  VL   ALG ++YQ+LPIDAVPDITNVQVQINT APGYSPLE
Sbjct: 1    MIDKLIQFSIARRWLVMFLVLVTGALGVWNYQQLPIDAVPDITNVQVQINTEAPGYSPLE 60

Query: 61   VEQRITYPLETVMAGLPKLEQTRSLSRYGLSQITVIFEEGTDIYFARQLVNERLGGAKDQ 120
            VEQRITY +E  + GLP +E TRS+SRY LSQ+TV+FE+GTDIYFAR L+NERL  AK +
Sbjct: 61   VEQRITYLVELAITGLPYVESTRSISRYALSQVTVVFEKGTDIYFARNLINERLQQAKSE 120

Query: 121  LPDGVTPTLGPISTGLGEIYFWTVEAEEGATKSDGTPYTPADLREIQDWIIKPQVRNVPG 180
            +P G+ P +GP++TGLGEI+ + V A+ GA   +G PY    LR +QDW+I+PQ+R VPG
Sbjct: 121  MPSGIDPAMGPVATGLGEIFHYAVHAKPGALMENGEPYDATALRTLQDWVIRPQLRLVPG 180

Query: 181  VTEINTIGGYAKEYQIAPNPDTLRSFGLTLQDLIEAVEQNNNNLGAGYIEKRGEQYLVRA 240
            VTE+NTIGG+ K++ + P P  L ++ L+  DL+ A+E+NN N+GAGYIEK GEQYL+RA
Sbjct: 181  VTEVNTIGGFEKQFHVTPEPSKLLAYQLSFDDLVAALEKNNANIGAGYIEKNGEQYLIRA 240

Query: 241  PGQMQSVEDIRDTLISNVDGTPVRIRDVATVEVGKELRTGAATENGREVVLGTAFMLIGE 300
            PGQ+  +  I   +++   G P+ + DVA V  GKELRTGAAT +G E VLGTA ML+G 
Sbjct: 241  PGQVADIPAIEKIIVARRAGLPITVADVAEVGFGKELRTGAATRDGEETVLGTAVMLLGG 300

Query: 301  NSRVVSRAVDDKMKEINLSLPEGVKAITVYDRTVLVDKAISTVKKNLTEGAILVVVILFL 360
            NSR VS+ V  K+ EIN +LPEGV A  VY+RTVLVDK I+TV+ NL EGA+LVVV+L +
Sbjct: 301  NSRTVSQDVSAKLLEINKTLPEGVIAEPVYNRTVLVDKTIATVQANLAEGAVLVVVVLLI 360

Query: 361  FLGNIRAAILTALVIPLSMLFTFTGMVANQVSANLMSLGALDFGIIIDGAVVIVENCVRR 420
             LGN+RAA+LTA+VIPLSML   TGMV  +VSANLMSLGALDFG+I+DGAV+IVENC+ R
Sbjct: 361  MLGNVRAALLTAMVIPLSMLMLMTGMVQTKVSANLMSLGALDFGLIVDGAVIIVENCIMR 420

Query: 421  LAHAQSHHGRALTLSERLHEVFAAAKEVRRPLLYGQLIIMIVYLPIFALTGVEGKMFTPM 480
            LA  Q H GR L L ER   VFAA +EV  P L   L++++V LPI ALTGVEGKMFTPM
Sbjct: 421  LAGRQHHLGRTLKLDERFQTVFAATREVFAPSLISVLVVILVNLPILALTGVEGKMFTPM 480

Query: 481  AFTVVTALFGAIILSVTFVPAAVALFIGKRVTEKENFLIRNAKRAYAPALDAVMANKPAV 540
            A  V+ AL  A++LS+TFVPAAVALF+   + EK+NF++R++KR YAP L   +  +  V
Sbjct: 481  AMAVIMALLSALVLSLTFVPAAVALFMTGHIEEKDNFIVRHSKRFYAPVLAWALKFRVLV 540

Query: 541  LTFAVVVVILSGLVGSRMGSEFVPSLNEGDFAIQALRVPATSLSQSVEMQQQLERKLMDE 600
            L+ A++ V+L G + +RMG+EF+P+L+EGD A+QALR+P TSL+QS++MQ QLE+ ++ E
Sbjct: 541  LSAALIFVVLVGALATRMGTEFIPNLDEGDIAVQALRIPGTSLTQSLDMQFQLEKAVL-E 599

Query: 601  FPEIERIFARTGTAEVASDAMPPNISDGYVMLKPQEQWPDPGKSRNQLLSEVQASAAELP 660
             PE++  FAR GTAEVASD M PNISDGYVML+ + +WPDP K++ QLL E+      LP
Sbjct: 600  IPEVKTYFARVGTAEVASDPMGPNISDGYVMLRDRSEWPDPDKTKAQLLEEIGEKLTLLP 659

Query: 661  GNNYEFSQPIQLRFNELISGVRAAVAVKIYGDDMDVLNSTAAEVSEVLGQVPGASEVTVE 720
            GN YE SQPIQLRFNELISGVR+ + +K++GDD+D L  + +E++ VL  + GA  V VE
Sbjct: 660  GNAYEISQPIQLRFNELISGVRSDLGIKVFGDDLDQLLKSGSEIAAVLTGIEGAEGVKVE 719

Query: 721  QTTGLPMLTIDIDRDQIARYGLSLDTVQQAVAVAIGGREAGTLFQGDRRFDIVVRLPDEI 780
            Q +GLP+L+I+ DR  + RYGL++  VQ  VA A GG EAG +F+GD+RF IVVR+ + I
Sbjct: 720  QVSGLPILSINADRSAMYRYGLNVADVQDVVAAATGGEEAGLIFEGDQRFSIVVRVAEGI 779

Query: 781  RSDLAAIERLPIALPRELNSTISYIPLGEVATLDLAPGPNQISREEGKRRIVVSANVRGR 840
            R DL A+ERLPI LP        Y+PL EVA+L LAPGPNQISRE GKRR+VVSANVRGR
Sbjct: 780  RGDLRALERLPIPLPEG-----GYVPLREVASLTLAPGPNQISRENGKRRLVVSANVRGR 834

Query: 841  DIGSFVSEAEQKIQAQVDIPAGYWIDWGGTFEQLESATKRLQIVVPVALLLVFILLFMMF 900
            D+G FV+E + K+  QV +P GYW+++GGTFEQL+SA++RL ++VPV L+++F LL M F
Sbjct: 835  DLGGFVAEVQGKVAQQVKLPPGYWLEYGGTFEQLQSASQRLSLLVPVTLVMIFALLMMTF 894

Query: 901  NNVKDGLLVFTGIPFALTGGIVALWLRDIPLSISAGVGFIALSGVAVLNGLVMISFIRSL 960
             + KD  LVF+G+P ALTGG++ALWLRDIPLSI+AGVGFI L GV+VL G++M+S  R  
Sbjct: 895  GSAKDAALVFSGVPLALTGGVIALWLRDIPLSITAGVGFITLCGVSVLTGVMMVSAFRDE 954

Query: 961  REQGLPLDTAIREGALTRLRPVLMTALVASLGFVPMALNVGTGAEVQRPLATVVIGGILS 1020
              +G  ++ AI+ GA+ RLRP+LM ALVA+LGF+PMALN  TGAEVQRPLATVVIGGI+S
Sbjct: 955  LNRGESVEQAIQGGAMLRLRPILMVALVAALGFLPMALNTSTGAEVQRPLATVVIGGIIS 1014

Query: 1021 STVLTLLVLPLLYQMAHRREDELEEQEIALA 1051
            ST+LTLLVLP LY++A R+  E+++  + +A
Sbjct: 1015 STLLTLLVLPGLYRLAWRKPKEIDDNGVPIA 1045