Pairwise Alignments

Query, 448 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 77/309 (24%), Positives = 141/309 (45%), Gaps = 23/309 (7%)

Query: 121 ISLATAQPAKIKSAIELPGEITFNQDRTAQVVPRLSGVVEAVKVDLGEQVKQGQVLAVIA 180
           +++ TA P      IE  G I  NQ  T  +    +GV++ +  + G QV + Q L ++ 
Sbjct: 44  VTVVTANPVDWVPVIEAIGFIEPNQGVT--LTTETAGVIDQITFESGTQVAKDQPLVLL- 100

Query: 181 STDLSERRSEFYAAQKRLALAQKTYRREKELWEERISAEQDYLQAQQALREAELTVANAN 240
             D +  R+   + + RL  A+  Y R K L+ +   +++ Y        EAE +    +
Sbjct: 101 --DSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISKESY-------DEAEASYYALS 151

Query: 241 AQLQALGSDAGKPDALSRYELRAPFDGMIVEKDITLGESVNTDDQIFIISDLSTVWADIS 300
           A +++L +       ++R E++APF G+I  +++ LG+ +     I  + D S +    +
Sbjct: 152 ADIESLKA------TIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFT 205

Query: 301 VPANALSAVRVGSNAVIEATAF-ESSANGTVSYVGSLVGQQSRAATARVTLPNPEGVWRP 359
           VP   +S + +     I   A+ ++S  G++S +   V  QS     +  +PN +G  R 
Sbjct: 206 VPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRS 265

Query: 360 GLFVKVQVGAGEASVPVAVSPDAI-HTLEEKPVVFVRTDHG--FAAQPIVS-GRSDSDAV 415
           G+F +  +   +    V +   AI +TL    V  V  ++G     Q +V  G       
Sbjct: 266 GMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIA 325

Query: 416 EIKEGLQPG 424
            I EG++PG
Sbjct: 326 HILEGVKPG 334