Pairwise Alignments

Query, 613 a.a., copper-resistance protein, CopA family from Pseudomonas stutzeri RCH2

Subject, 462 a.a., copper oxidase from Herbaspirillum seropedicae SmR1

 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 54/132 (40%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 69  NGTIPGPLLRWREGDTVTLRVRNKLSEDTSIHWHGMILPANMDGVPGLSFHGIAPDGMYV 128
           NG  PGP +   EGD V + V NKL E TS+HWHG  LP  MDGV GL+   I P   YV
Sbjct: 100 NGQSPGPTIEVVEGDRVRIFVTNKLPEATSVHWHGQRLPNGMDGVSGLTQPAIPPGKTYV 159

Query: 129 YKFQVKQNGTYWYHSHSG--LQEQLGVYGPLVIDAKDPEPFSYDRDYVVMLTDWSDEDPA 186
           Y+F  ++ GT+ YH H+   +Q  +G+ G  V   KDP     DRD+V ++  + D  P 
Sbjct: 160 YEFTARRAGTFMYHPHADEMVQMAMGMMGFWVTHPKDPGFMRVDRDFVFLMNAY-DIAPG 218

Query: 187 RILSKLKKQSDY 198
             + K+    D+
Sbjct: 219 ASVPKVSTMLDF 230



 Score = 55.1 bits (131), Expect = 7e-12
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 513 WSFDGIEFSDSEPLRLKYGERVRITLVNDTMMTHPIHLHGMWSDLEDENGKFMV-----R 567
           W+++   F   +PL ++  +RVRI + N TM  HP+HLHG    +   +G ++       
Sbjct: 233 WTWNSRAFPGIDPLVVRQNDRVRIRVGNLTMTNHPLHLHGHEFSVTGTDGGWVPPAARWP 292

Query: 568 KHTIDMPPGSKRSYRVTADALGRWAYHCHLLLH 600
           + T D+  G  R+    A   G WA HCH   H
Sbjct: 293 EVTTDIAVGQMRAIEFDATEEGDWALHCHKAHH 325



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 9/96 (9%)

Query: 513 WSFDGIEFSDSEPLRLKYGERVRITLVNDTMMTHPIHLHGMWSDLEDENGKFMVRKHTID 572
           W ++G   S    + +  G+RVRI + N       +H HG        NG   V   T  
Sbjct: 97  WGYNGQ--SPGPTIEVVEGDRVRIFVTNKLPEATSVHWHGQ----RLPNGMDGVSGLTQP 150

Query: 573 -MPPGSKRSYRVTADALGRWAYHCHL--LLHMEMGM 605
            +PPG    Y  TA   G + YH H   ++ M MGM
Sbjct: 151 AIPPGKTYVYEFTARRAGTFMYHPHADEMVQMAMGM 186