Pairwise Alignments

Query, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

Subject, 187 a.a., tRNA pseudouridine synthase A (EC 4.2.1.70) from Xanthomonas campestris pv. campestris strain 8004

 Score =  227 bits (579), Expect = 9e-65
 Identities = 116/175 (66%), Positives = 134/175 (76%), Gaps = 3/175 (1%)

Query: 32  LLLLNKPFDVLTQFNDADG--RATLKDFVDVPGVYPAGRLDRDSEGLLLLTNDGQLQARI 89
           L+LLNKP+ VL+QF+D     + TL +F   P VY AGRLD DSEGLLLLT+DG L  R+
Sbjct: 2   LVLLNKPYGVLSQFSDRSTPPKRTLAEFGLPPQVYAAGRLDHDSEGLLLLTDDGPLAHRL 61

Query: 90  ADPKHKLPKTYWVQVEGEVSAEQLQRLRDGVELNDGMTLPAEARQLE-EPELWPRNPPVR 148
            DP+HK PKTYWVQVEG+    QLQ L DGV LNDG T PA  R+LE  P LWPR+PPVR
Sbjct: 62  TDPRHKQPKTYWVQVEGDPDTSQLQALCDGVLLNDGPTRPANVRRLECAPTLWPRDPPVR 121

Query: 149 FRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWTLGGLQPGEWR 203
            RK+VP +WLE+ I EGRNRQVRRMTA+VGLPTLRLVRV IG W+L  LQPG+WR
Sbjct: 122 VRKTVPDAWLEVQITEGRNRQVRRMTASVGLPTLRLVRVAIGAWSLASLQPGQWR 176