Pairwise Alignments

Query, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

Subject, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 20/175 (11%)

Query: 30  PRLLLLNKPFDVLTQFNDADGRATLKDFVDV-PGVYPAGRLDRDSEGLLLLTNDGQLQAR 88
           P  + LNKP  + T   + D    + DF+     ++P GRLD+ S+GL+ LTNDG +  +
Sbjct: 77  PIYIALNKPTGI-TCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDIVNK 135

Query: 89  IADPKHKLPKTYWVQVEGEVSAEQLQRLRDGVELNDGMTLPAEARQLEEPELWPRNPPVR 148
           I    +   K Y V+V+  ++ E ++++  GV + D +TLP +  Q              
Sbjct: 136 ILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQ---------ETQYS 186

Query: 149 FRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWTLGGLQPGEWR 203
           FR         +V+ +G NRQ+RRM  A+G    +L RVRI   TL G+  G+WR
Sbjct: 187 FR---------IVLTQGLNRQIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWR 232