Pairwise Alignments

Query, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

Subject, 188 a.a., pseudouridine synthase from Herbaspirillum seropedicae SmR1

 Score =  219 bits (558), Expect = 3e-62
 Identities = 109/177 (61%), Positives = 138/177 (77%), Gaps = 3/177 (1%)

Query: 32  LLLLNKPFDVLTQFNDADGRATLKDFVDVPGVYPAGRLDRDSEGLLLLTNDGQLQARIAD 91
           L+LLNKPF V++QF+    R TL D++D+P VYPAGRLD DSEGLLLLT+DG+LQ  IA 
Sbjct: 3   LILLNKPFQVMSQFSAHPERQTLADYIDIPNVYPAGRLDADSEGLLLLTDDGKLQHAIAH 62

Query: 92  PKHKLPKTYWVQVEGEVSAEQLQRLRDGVELNDGMTLPAEARQLEEPE-LWPRNPPVRFR 150
           P+ KLPKTY  QVEG+ S E L +LR  ++L D +T  ++AR ++EP  +WPRNPP+R R
Sbjct: 63  PRRKLPKTYLAQVEGQPSPEALDKLRQPLDLGDFVTQGSQARLIQEPGWMWPRNPPIRQR 122

Query: 151 KSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWTLG--GLQPGEWREV 205
           ++ PTSW+ L I EG+NRQVRRMTAAVGLPTLRLVR+ IGP++L    + PGEWREV
Sbjct: 123 QNQPTSWIALTISEGKNRQVRRMTAAVGLPTLRLVRIAIGPFSLATHPVMPGEWREV 179