Pairwise Alignments

Query, 209 a.a., pseudouridine synthase from Pseudomonas stutzeri RCH2

Subject, 256 a.a., rRNA pseudouridine synthase from Bifidobacterium breve UCC2003

 Score =  112 bits (280), Expect = 6e-30
 Identities = 67/174 (38%), Positives = 98/174 (56%), Gaps = 17/174 (9%)

Query: 33  LLLNKPFDVLTQFNDADGRATLKDFVD--VPGVYPAGRLDRDSEGLLLLTNDGQLQARIA 90
           L LNKP  VL+  +D  GR TL+D V      ++  GRLD DSEGL+L+TNDG+L   + 
Sbjct: 81  LALNKPRKVLSAMDDPKGRYTLRDIVGDKYERIFHMGRLDYDSEGLILMTNDGELSQHVM 140

Query: 91  DPKHKLPKTYWVQVEGEVSAEQLQRL-RDGVELNDGMTLPAEARQLEEPELWPRNPPVRF 149
            PK+++ KTY   +EG +S    +RL   GV+L+DG         ++             
Sbjct: 141 HPKYEVEKTYIATLEGRISGTVCRRLVTTGVQLDDGWIKLDHCAIID------------- 187

Query: 150 RKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGPWTLGGLQPGEWR 203
             S   + +++V+  G+NR VRR+  ++G P  RLVR +IGP  LG L+PG +R
Sbjct: 188 -SSRDFTMVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGELKPGSYR 240