Pairwise Alignments

Query, 358 a.a., urea ABC transporter, permease protein UrtC from Pseudomonas stutzeri RCH2

Subject, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  100 bits (249), Expect = 5e-26
 Identities = 93/364 (25%), Positives = 154/364 (42%), Gaps = 44/364 (12%)

Query: 1   MNQPLTLTAAQKAGPKLTAVALGIALVVLLAMPLLHLLPAEHALHVSAYTLTLVGKILCY 60
           M++  T  +A + G  L     G+A++++LA     L P           L L+ +I   
Sbjct: 4   MSEASTALSAGRRG--LGRDLAGLAVILVLAGIGYLLFPNN---------LALLTRITAI 52

Query: 61  AIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQSAGDGLPAFMSFLAWNELPWY 120
           A++ L+LDLV GY G+ +LGH   F  G YA G+  +                       
Sbjct: 53  ALLVLSLDLVTGYCGVATLGHAALFGSGAYAAGIAAVH---------------------- 90

Query: 121 WYGTSSFLWAMCLVVLVPGVLAFVFGFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETG 180
            +G +  L  +   +L   +     G    R+   G+   +++ AL         +  + 
Sbjct: 91  -FGITDPLLMLAAGILGGALAGLACGVVILRAH--GLPQLVLSIALIHLFHEFANKASSW 147

Query: 181 FGGNNGFTDFKT--ILGFSISAPATRATLFFATVLLLVGSLYLGFRLARSKFGRVLTALR 238
            GG++G        ++G        R    F  VLL +  + L   + RS FG +   +R
Sbjct: 148 TGGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVVLLAIVFVLLRL-VVRSPFGMLCRGIR 206

Query: 239 DAENRLMFCGYDPRGYKLFIWTLSAVLCGLAGALYVPQVGIINPSEMAPTQSIEAAVWVA 298
           +   R+   G  P    L ++ +S  + G+ GAL      ++    ++ T S E+ V + 
Sbjct: 207 EDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAESLVMLV 266

Query: 299 LGGRGTLIGPLLGAGIVNGMKSWFTVAFPEYWLFALGALFIIVTLYLPKGVIG-----LI 353
           LGG G+L G L G  +    +   + A P +WL  +GAL I V L+ PKG+ G     L 
Sbjct: 267 LGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIAVVLFAPKGLYGTVAEVLA 326

Query: 354 KRRG 357
           +RRG
Sbjct: 327 RRRG 330