Pairwise Alignments

Query, 381 a.a., rod shape-determining protein RodA from Pseudomonas stutzeri RCH2

Subject, 372 a.a., rod shape-determining protein RodA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  408 bits (1049), Expect = e-118
 Identities = 200/362 (55%), Positives = 268/362 (74%), Gaps = 1/362 (0%)

Query: 17  RRASLLQRLHIDGLLLVLLLVLAAGSLFILYSASGKNWDLVIKQATSFGLGLGAMLVIAQ 76
           +R ++ QRLHID  LL+ LL +    LF++YSASG++  ++ +Q     L +  M  +AQ
Sbjct: 10  QRQNIWQRLHIDLPLLLGLLAVMGFGLFVIYSASGEDLGMMERQLFRMFLSICVMFTMAQ 69

Query: 77  LEPRFMARWVPLGYLGVVALLVAVEVVGHTAMGATRWINIPGVIRFQPSEFMKIIMPMTI 136
           + P  + RW    YL  V LL+AV   G    GA RW+N+ G + FQPSE +K+  P+T+
Sbjct: 70  INPEALKRWALPIYLAGVVLLLAVHFFGEINKGAQRWLNL-GFMEFQPSELIKLAFPITM 128

Query: 137 AWYLSSRSLPPSIKHTAISLAMILIPFVLILKQPDLGTSLLILASGAFVLFIGGLRWRWI 196
           AWY+S   LPP  ++ A +  ++LIP +LI KQPDLGTS+L+ ASG FVLF+ G+ W  +
Sbjct: 129 AWYISKFPLPPKKRYLAGAGVILLIPTLLIAKQPDLGTSILVAASGIFVLFLSGMSWAIV 188

Query: 197 ISAVAAVVPIAVAMWYFVLRDYQKQRVLTFLDPESDPLGTGWNIIQSKAAIGSGGVFGKG 256
              +AAV+     +WYF++ DYQ+ RVLT LDPE DPLG G++IIQSK AIGSGG++GKG
Sbjct: 189 GGFIAAVLAFLPILWYFLMHDYQRTRVLTLLDPEQDPLGAGYHIIQSKIAIGSGGLWGKG 248

Query: 257 WLAGTQSHLDFLPESHTDFIIAVLAEEFGLVGVCLLLLVYILLITRGLVITVQAQTLFGK 316
           WL GTQS L+F+PE HTDFI AV+ EEFGL+G  +LLL+Y+ +I RGLVI   AQT F +
Sbjct: 249 WLDGTQSQLEFIPERHTDFIFAVIGEEFGLIGSIILLLMYLYIIGRGLVIASNAQTSFAR 308

Query: 317 LLAGALTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSGFGVLMSIHTHRK 376
           LLAG++T+TFFVYVFVNIGMVSG+LPVVGVPLP +SYGGTS++TL++GFG+LMSIHTHR+
Sbjct: 309 LLAGSITLTFFVYVFVNIGMVSGILPVVGVPLPLVSYGGTSMLTLMTGFGILMSIHTHRR 368

Query: 377 WI 378
           ++
Sbjct: 369 FV 370