Pairwise Alignments

Query, 239 a.a., Putative effector of murein hydrolase from Pseudomonas stutzeri RCH2

Subject, 244 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.7 bits (239), Expect = 4e-25
 Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 10/220 (4%)

Query: 18  LFGVGITLAVFQLAYAAYEKTRWVFLQPVLVSMTLIVGILLLCGIDYDEYRISAQWLTLL 77
           L  + +TL  +  A   Y++ R  +L P++++  +I  ++    I    Y     WL  +
Sbjct: 23  LISLLLTLFCYFAAKILYQRHRVWWLAPIVLAPVVITLLVFNLDIPLPTYFEYTHWLMAM 82

Query: 78  LGPATVALAVPLYLNLRRIRELFGPIVITL-LVAGVFATALGMALAWAF----GADRMIL 132
           L PAT+A A+P+Y   + IR+   P+ I   ++AG+    LGM  +W           + 
Sbjct: 83  LAPATIAFALPIYRERKLIRQY--PLTIAFGVIAGLL---LGMVSSWLLVKFVPLPVELS 137

Query: 133 MTLAPKSVTSPIAMLVAEQIGGVVALAAVFVMITGVLGAILGPELLRRFGVQHPAARGIA 192
            +L  +SV++P AM      GGV  L A+ V+ITG++G ++   L +   ++    +G+A
Sbjct: 138 KSLLVRSVSTPFAMEATGAFGGVPELTAMMVLITGIIGMLVCEPLFKLMHIRTSLGKGVA 197

Query: 193 LGLTAHAVGTAQALQESDECGAFAALAMSLMGVMTAVLLP 232
           LG +AH  G A+A +   + G  A+L M  +G+   +  P
Sbjct: 198 LGASAHGAGAAKASELGQQEGVIASLTMIFIGIAMVLGAP 237