Pairwise Alignments

Query, 343 a.a., ribosome small subunit-dependent GTPase A from Pseudomonas stutzeri RCH2

Subject, 310 a.a., putative GTPase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  167 bits (424), Expect = 2e-46
 Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 15/308 (4%)

Query: 47  GLVIAHFGVQVEVEALEGEQSGQVFRCHLRANLPA--------LVTGDRVVWRPGNQGIG 98
           GLVI + G   +V+       GQ   C ++ N           +  GDRV      +G  
Sbjct: 3   GLVIKNTGSWYQVKT----DDGQFIECKIKGNFRLKGIRSTNPVAVGDRVQIILNQEGTA 58

Query: 99  VIVAQLPRHSELCRPDTR--GQLKPVAANVD-LIVIVFAPLPEPHANLIDRYLVAAEHAG 155
            I     R + + R  +    Q   +AAN+D  +++V    PE     IDR+L +AE   
Sbjct: 59  FINEIEDRKNYIIRRSSNLSKQSHILAANLDQCMLVVTVNYPETSTIFIDRFLASAEAYR 118

Query: 156 ITPLLLLNKVDLIDDQNEAALNRLLEVYRQLNYPLLEVSAHGGGGMDALKERLDGHVSVF 215
           +   L+ NKVD  ++     L+ L+ +Y  + YP  +VSA  G G+DA+K+ L+G +++F
Sbjct: 119 VPVKLVFNKVDAYNEDELRYLDALINLYTHIGYPCFKVSAKEGTGVDAIKKDLEGKITLF 178

Query: 216 VGQSGVGKSSLVNSLLPGVDTRVGALSEMTGKGTHTTTTARLFHFPGGGELIDSPGIREF 275
            G SGVGKS+L+N++LPG   + G +S    KG HTTT + +F   G G +ID+PGI+ F
Sbjct: 179 SGHSGVGKSTLINAILPGTKVKTGEISTYHNKGMHTTTFSEMFSVDGDGYIIDTPGIKGF 238

Query: 276 GLGHVSRADVEAGFIEFQDLLGHCRFRDCKHDREPGCALLQALEDGRIQPQRMSSYRHIL 335
           G   +   ++   F E   +   C++ +C H  EPGCA+ +A+E   I   R +SY ++L
Sbjct: 239 GTFDMEEEEIGHYFPEIFKVSADCKYGNCTHRHEPGCAVREAVEKHLISESRYTSYLNML 298

Query: 336 SSLPEPDY 343
               E  Y
Sbjct: 299 EDKEEGKY 306