Pairwise Alignments

Query, 343 a.a., ribosome small subunit-dependent GTPase A from Pseudomonas stutzeri RCH2

Subject, 354 a.a., ribosome-associated GTPase (RefSeq) from Shewanella sp. ANA-3

 Score =  288 bits (737), Expect = 1e-82
 Identities = 156/344 (45%), Positives = 217/344 (63%), Gaps = 12/344 (3%)

Query: 3   KRQLNRRQNWRIEKIQEERAARAARRESRALEELEGGDLGPEQTGLVIAHFGVQVEVEAL 62
           K+ L++ Q  R+    E+R  R      +   EL+   LGPEQ+G VI+ FG   ++E  
Sbjct: 4   KKPLSQGQLRRMRANHEKRLNRD--NGDKNAPELQDSSLGPEQSGTVISRFGQHADIET- 60

Query: 63  EGEQSGQVFRCHLRANLPALVTGDRVVWR-----PGNQGI-GVIVAQLPRHSELCRPDTR 116
              + GQ+ RC++R  + +LVTGD+V+ R       N GI G++ A  PR S L RPD  
Sbjct: 61  ---EDGQIVRCNIRRTIKSLVTGDKVIVRLAIETQANSGIAGIVEAVHPRRSSLSRPDLY 117

Query: 117 GQLKPVAANVDLIVIVFAPLPEPHANLIDRYLVAAEHAGITPLLLLNKVDLIDDQNEAAL 176
             +K +A+N+D I+IV + LP     +IDRYLVAAE   I P+++LNK+DL+  +   A+
Sbjct: 118 DGVKIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPIIILNKIDLLTPEEAPAI 177

Query: 177 NRLLEVYRQLNYPLLEVSAHGGGGMDALKERLDGHVSVFVGQSGVGKSSLVNSLLPGVDT 236
              L+ Y  + YP+ +VS+  G G+D +K  L   VSVF GQSGVGKSSLVN+LLP  + 
Sbjct: 178 EAALKRYEAIGYPVYKVSSKLGEGLDTIKALLKDKVSVFAGQSGVGKSSLVNALLPEAEL 237

Query: 237 RVGALSEMTGKGTHTTTTARLFHFPGGGELIDSPGIREFGLGHVSRADVEAGFIEFQDLL 296
            VG +S+ +G G HTTTTA+L H P GG+LIDSPG+REF L H+    V   FIEF+D L
Sbjct: 238 LVGDVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFRDFL 297

Query: 297 GHCRFRDCKHDREPGCALLQALEDGRIQPQRMSSYRHILSSLPE 340
           G C+FRDCKH  +PGCAL  A++ G+I   R ++Y  I++SL E
Sbjct: 298 GGCKFRDCKHGDDPGCALKAAVDAGKISEDRFNNYHRIIASLDE 341