Pairwise Alignments

Query, 890 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  347 bits (890), Expect = 2e-99
 Identities = 189/429 (44%), Positives = 278/429 (64%), Gaps = 4/429 (0%)

Query: 453 SKLAH-QHIERLAYTDNLTNLGNRPYFIRSLEERF--AAGAEPRLCLLLVDIDNFKRIND 509
           +K+A+ +++E LAY D LT L NR  F + L +    A+    +L +L +D+D FK++ND
Sbjct: 345 AKIAYAENVEYLAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRFKQVND 404

Query: 510 SLGHQTGDKLLTSLARRLRNGLSQQSVLARFASNEFALLFDDMELDEGLRLADQ-VLRVL 568
           +LGH  GD+LL  +A RL+  L     +AR   +EF +L  ++  D+ +  A Q VL  +
Sbjct: 405 TLGHDAGDQLLKEVALRLKACLRTSDTVARLGGDEFVILLPELSDDKDVATAAQKVLGAI 464

Query: 569 DKPLFVDKQLISVSASLGLACSPQHGRDPETLMKHAGQALHKAKANGKNQVQIFTEALHA 628
            +P  +  Q   V+AS+G++  PQ G D +TL K+A  A+++AK  GKN  Q ++  L+A
Sbjct: 465 ARPFNLQGQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFYSAKLNA 524

Query: 629 EANYKLFVENNLRRALTQNELEVFYQPKLCLRSGQLQGLEALLRWNHPEKGMIRPDQFIS 688
           ++  ++ +E +LR AL ++E ++ YQ K  + SG++ G+EALLRWNHP+ G++ P QFI 
Sbjct: 525 DSLERMTLELSLRHALERHEFQLHYQAKRDIGSGRITGMEALLRWNHPDLGIVAPMQFIP 584

Query: 689 VAEETGLIIPIGKWVLREACRMGVRLSALGHGKPQIAINLSPKQFSDPDLLGSIASILLE 748
           VAEETGLI+PIGKWVL+ AC+  V     G     +A+NL+ +QF+D +LL  +A IL E
Sbjct: 585 VAEETGLIVPIGKWVLKTACQQNVAWQQQGLPCLGVAVNLTARQFADENLLTDLAGILAE 644

Query: 749 EQLSPGQLELELTESLLLDATEETRQQLIGLKALGLTLAMDDFGTGYSSLSYLKKFPIDV 808
             +    LELE+ ESLL+   ++    L GLK L + +A+DDFG GYSSLS L++FP+DV
Sbjct: 645 TGMDARLLELEIAESLLMQDVKKALNVLTGLKHLKVRIAIDDFGIGYSSLSALEQFPLDV 704

Query: 809 IKIDRSFIKDIPDNQDDMEITSAVIAMARKLHLKVVAEGIETAEQLKFLRHHRCDIGQGY 868
           IKIDRS I D     +D  +T A+IAM R L L VVA+G+ET EQ  FLR + CD  QG+
Sbjct: 705 IKIDRSCICDTSSVSEDKALTEAIIAMGRTLSLTVVAQGVETKEQADFLRDNACDEFQGF 764

Query: 869 LFDKPIPGN 877
            F+KP+P +
Sbjct: 765 YFNKPVPAD 773