Pairwise Alignments

Query, 185 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

Subject, 204 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score =  132 bits (331), Expect = 5e-36
 Identities = 85/183 (46%), Positives = 113/183 (61%), Gaps = 7/183 (3%)

Query: 6   IGYARVSTQ--GQDLDQQRSSLAQAGCQR--IFEEKISGSKRDRPELGRVLDHLRAGDVL 61
           IGYARVS     Q LD Q  +L  AG +R  I+++  SG + DRP L   L  LR GDVL
Sbjct: 3   IGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGDVL 62

Query: 62  TVTRLDRLARSTTDLLHIAEQLKERDAGLRSLAEPWA--DTTSPAGRMVLTIFAGIADFE 119
            V +LDRL RS   L++  ++L +R  GLR L    A  DTT+ +GRMV  IFA +A+FE
Sbjct: 63  VVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAEFE 122

Query: 120 RSLISERTSAGRAAAKARGVRFGPKPALSLEQIAHAR-RLVEEGQSVSEVARLLCVHRAT 178
           R LI ERT AG A+A+ARG + G K AL+  Q+  A+  + +   SVS++ + L + R T
Sbjct: 123 RDLIRERTMAGLASARARGRKGGRKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIERVT 182

Query: 179 LYR 181
           LYR
Sbjct: 183 LYR 185