Pairwise Alignments

Query, 185 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

Subject, 188 a.a., recombinase family protein from Synechocystis sp000284455 PCC 6803

 Score =  119 bits (298), Expect = 3e-32
 Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 6   IGYARVSTQGQDLDQQRSSLAQAGCQRIFEEKISGSKRDRPELGRVLDHLRAGDVLTVTR 65
           +GYARVS+ GQ+LD Q   L+   C ++F+EK SGS   RP L   L +LR GD L VTR
Sbjct: 4   VGYARVSSVGQNLDVQLEKLSH--CDKVFKEKQSGSSHQRPVLQECLRYLREGDTLVVTR 61

Query: 66  LDRLARSTTDLLHIAEQLKERDAGLRSLAEPWADTTSPAGRMVLTIFAGIADFERSLISE 125
           LDRLARST  L  IA +L+ +   L+ L +    T    GR++  +   IA FE  + +E
Sbjct: 62  LDRLARSTLHLCQIAAELEGKQVVLQVLDQN-IHTGDATGRLLFNMLGAIAQFETEIRAE 120

Query: 126 RTSAGRAAAKARGVRFGPKPALSLEQIAHARRLVEEGQSVSEVARLLCVHRATLYRALS 184
           R   G   AKARGVR G +  L+ +Q+   R+  E+G  +  + +   + +A++YR L+
Sbjct: 121 RQMDGIQNAKARGVRLGREKQLTEQQVLELRQRREQGTLIKILMKDYKLSKASIYRYLN 179