Pairwise Alignments

Query, 185 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

Subject, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

 Score =  158 bits (399), Expect = 6e-44
 Identities = 81/181 (44%), Positives = 123/181 (67%), Gaps = 2/181 (1%)

Query: 6   IGYARVSTQGQDLDQQRSSLAQAGCQRIFEEKISGSKRDRPELGRVLDHLRAGDVLTVTR 65
           IGYARVST+ Q+L++Q   L +AG ++IF EKISG+KR+RPE  ++ D LRAGD++ VT 
Sbjct: 3   IGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFDILRAGDIIIVTE 62

Query: 66  LDRLARSTTDLLHIAEQLKERDAGLRSLAEPWADTTSPAGRMVLTIFAGIADFERSLISE 125
           L R++RST DL+ I E  K     ++SL E W DTTS  G+++ TIFAG+A+FER LISE
Sbjct: 63  LTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAHGKLLFTIFAGLAEFERDLISE 122

Query: 126 RTSAGRAAAKARGVRFGPKPALSLEQIAHARRLVEEGQ-SVSEVARLLCVHRATLYRALS 184
           R  +G  AA++RG R G +P +  E++  A ++ +  + ++ ++ +   + + TLY  L 
Sbjct: 123 RVKSGLNAARSRG-RLGGRPKIDSEKVEMALKMYDSKEYTIKQILKATGISKFTLYNYLE 181

Query: 185 Q 185
           +
Sbjct: 182 K 182