Pairwise Alignments

Query, 275 a.a., phosphonate ABC transporter, permease protein PhnE from Pseudomonas stutzeri RCH2

Subject, 267 a.a., phosphonate ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  146 bits (368), Expect = 5e-40
 Identities = 84/218 (38%), Positives = 129/218 (59%), Gaps = 1/218 (0%)

Query: 57  NGLPSIATLAGEAMPPDFSGYRSWIRPLIDTLAMSIAGTAIAVVFSLVVAFVAARNTAPH 116
           +GL + A   G   PPD S        + +TL +++  +   ++FSL +  + ARN  P 
Sbjct: 49  SGLGNGAKFLGRMFPPDLSKGDILWGGIKETLQIAVLASLFGILFSLPIGLMGARNLMPS 108

Query: 117 PLVFGVARVLLNALRSVPELIMGIIFVAAVGFGALPGVLALGLHSVGMVGKFFAEAIEHV 176
            + +  AR L++  RS+  +I+ I+FV AVGFGAL GVLAL + S+G +GK FAEAIE +
Sbjct: 109 WISWP-ARALVSVCRSLHPVIVAILFVKAVGFGALAGVLALIVASIGFIGKLFAEAIEEI 167

Query: 177 DEAPVEAARAAGATPMQVLLHAVLPQVTPQFADVAIYRWEYNFRASTVMGMVGAGGIGFE 236
               VEA RA GA+ M V+L  VLPQV  +F   + Y+ + N R ST++G+VGAGG+G  
Sbjct: 168 SIKQVEAIRATGASFMNVILFGVLPQVMSRFVGFSTYQLDSNLRNSTMVGIVGAGGVGGV 227

Query: 237 LMGSLRIMQYQEVAAILLVILAMVTLVDAFSGVLRKRF 274
           L  + +   Y  V  IL+ I+ ++ + +  +  ++K F
Sbjct: 228 LFSAFQRFDYDFVFTILVTIITIIVVGELLANSVKKVF 265