Pairwise Alignments

Query, 287 a.a., phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein from Pseudomonas stutzeri RCH2

Subject, 324 a.a., phosphonate ABC transporter, periplasmic phosphonate-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  105 bits (263), Expect = 1e-27
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 7/266 (2%)

Query: 27  DPDVLKVALLPDENASELIKRNQPLKDYLEEHLDKKVQLIVTTDYSSMIEAMRFGRIDLA 86
           DPD L  A  P E+ +   +      D+L E   K V        ++ IEAMR GR+ +A
Sbjct: 57  DPDTLIFAYTPVEDPAVYAEAWSDFIDHLSEVTGKDVVFFPVQSNAAQIEAMRSGRLHVA 116

Query: 87  YFGPLSYVMAKSKSDIEPFAAMVI-DGKPTYRSVIIANVASGVNEYADLKGKKMAYGDRA 145
            F   S  +A + +   PFA M   DG   Y   II    SG+    D+KG ++A+    
Sbjct: 117 GFNTGSNPLAVNCAGFRPFALMAATDGSFGYEMEIITYPGSGIETIEDIKGGQLAFTSPT 176

Query: 146 STSSHLIPKAVLLETAGLTGGQDYEQHFVGTHDAVAVNVANGNADAGGLSEVIFNHAVER 205
           S S    P A+L    G+   +D+E  F G HD   + VAN +  A  ++  + +   ER
Sbjct: 177 SNSGFKAPSAILKAEYGMEAEKDFEPVFSGKHDNSILGVANKDYPAAAIANSVLHRMTER 236

Query: 206 GLIDPSKVKVLGYSGEYPQYPWAMRSNLSPELKTKVRDVFV-----GIDDPEVLRNFKAE 260
            ++   ++  +  S  +P   +    NL+PEL+ ++RD F+     G    E        
Sbjct: 237 EVVSEDQIVSIYTSQTFPTTGYGTAHNLTPELQDQIRDAFINFEWEGTSLEEEFSKSNEG 296

Query: 261 AFAPITDADY-DVIRNMGSLLGLDFA 285
            F P+   ++  VIR +    G+ +A
Sbjct: 297 QFLPMNYKEFWAVIRQIDEANGVSYA 322