Pairwise Alignments

Query, 300 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

Subject, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  124 bits (310), Expect = 3e-33
 Identities = 86/273 (31%), Positives = 139/273 (50%), Gaps = 12/273 (4%)

Query: 1   MRRWSFSNLILVLGLLFIYLPMVILVIYSFN-ASRLVTVWGGWSLKWYAGLLDNSQLMGA 59
           M  W  S  IL+    F+  PM I++  SF+ A+ L     G++L+ Y     +      
Sbjct: 1   MSVWIRSLAILIAA--FVAAPMFIVIPMSFSSAASLAFPPPGYTLQNYVNFFSDPNWTQP 58

Query: 60  VMRSLEVAAYTAVAAVALGTMAAFVLTRIPVFRGRTLFGGLVTAPLVMPEVITGLSLLLL 119
           +  SL +   T    + +   A+F L R  VF GRT+F  L+  P+++P ++  L   + 
Sbjct: 59  LTNSLLIGFGTVCVTMLVAVPASFALVR-HVFIGRTVFNLLIMLPMIVPTIVMALGYYIY 117

Query: 120 FVAMAQLVGWPAQRGLVTIWIAHTTFCSAYVAVVVMARLRELDLSIEEAAMDLGARPWKV 179
           F    +LV     +  + + +AH+        +++ A L+  D S+E AAM+LGA P+  
Sbjct: 118 F-GQLRLV-----QSYLGVILAHSCIALPMSTLILTAALKGFDRSVERAAMNLGASPFAT 171

Query: 180 FFLITMPMIAPSLAAGGMLSFALSLDDLVLASFVSGPGSTTLPMEIFSAVRLGVKPEINA 239
           F LIT P++ P+    G+ +F  S D+ V+A F+SG    TLP ++F+AVR    P I+A
Sbjct: 172 FRLITFPILRPAFTVAGLFAFIASFDEAVIALFISGRDKATLPRQMFNAVRQEADPTISA 231

Query: 240 VASLILLSVSLATFLAWYLTRRAEKRRVRAMQQ 272
            +S + L V LA    W L  +  +RR R + Q
Sbjct: 232 ASSFLFLLV-LAGVCIW-LAPQLVRRRTRPLGQ 262