Pairwise Alignments

Query, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas stutzeri RCH2

Subject, 597 a.a., acyl-CoA dehydrogenase from Caulobacter crescentus NA1000

 Score =  555 bits (1430), Expect = e-162
 Identities = 286/597 (47%), Positives = 382/597 (63%), Gaps = 10/597 (1%)

Query: 4   YQAPLRDMRFVLNEVFDAPKLWQALPALAEVVDAETADAILEEAGKITANSIAPLNRSGD 63
           YQ P+RD  F+L +V +  +    LP  ++    +  + ILE A + T   +APLN  GD
Sbjct: 3   YQPPVRDHAFILRDVLNIDQHGD-LPGFSDA-PFDVVEQILEAAAQFTGEVLAPLNTVGD 60

Query: 64  EEGCRWD--AGAVSTPAGYREAYQLYAKGGWVGVGGDPAFGGMGMPKVISAQVEEMMNSA 121
           + GC+ D     V+TP G+++AY+   +GGW  +G DPA+GG G+P V++    EM +SA
Sbjct: 61  KTGCKLDPVTNTVTTPPGFKDAYKQMCEGGWTAIGSDPAYGGQGLPHVVNLAFSEMSSSA 120

Query: 122 SLAFGLYPMLTSGACLSIYAHASEELKQKYLPNMYAGVWSGSMCLTEPHAGTDLGIIRTK 181
           ++AF +YP L  GA  +I+   S+E KQ +LP M +G W+G+M LTEPH GTDLG++RTK
Sbjct: 121 NMAFSMYPGLAHGAYSAIHVGGSDEQKQTFLPKMVSGEWTGTMNLTEPHCGTDLGLLRTK 180

Query: 182 AEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGSRGISLFLVPKVMVNED 241
           A PQADGSYK++G KI+I+ GEHD+ +NI+HLVLA++  APAG +GISLF+VPK + N D
Sbjct: 181 AVPQADGSYKITGQKIWISAGEHDMADNIVHLVLARIEGAPAGVKGISLFIVPKFIPNAD 240

Query: 242 GSLGERNS-LSCGSIEHKMGIQASATCVMNFDGAVGWMVGEPNKGLAAMFTMMNYERLGV 300
           GS+G RN    C  +E KMGI  +ATCVM +D AVG+++GE N GL  MF MMN  RLGV
Sbjct: 241 GSVGPRNEGAKCVGLEEKMGIHGNATCVMQYDEAVGYLIGEENSGLKIMFVMMNEARLGV 300

Query: 301 GIQGLATGERSYQSAIEYARDRIQSRAPTGPVAQDKAADPIIVHPDVRRMLLTMKALNEG 360
           G+QG+A GE +YQ+A+ +A+DR+Q R+ TGP   +  ADPIIVHPDVRRMLL  KAL EG
Sbjct: 301 GMQGVAQGEAAYQAAVAFAKDRLQGRSLTGPKNAEGPADPIIVHPDVRRMLLESKALIEG 360

Query: 361 GRAFSSYVALQLDIAKFSDDDEARQRAEAQVALLTPVAKAFLTDMGLETTVHGQQVFGGH 420
           GRAF  + AL  D++    D   R+++   + L+TPV K +LTD G +   +  QV GG 
Sbjct: 361 GRAFLFWTALHGDLSHVHPDPAVREKSSDYMGLMTPVLKGYLTDKGFQVCSNAVQVHGGS 420

Query: 421 GFIREWGQEQLVRDCRITQIYEGTNGIQALDLVGRKIVGSGGTMYQAFVDEIRAFIA--D 478
           GF   +   Q +RDCRI  IYEGTNG+QALDLVGRK+   GG     F  EI  FI   D
Sbjct: 421 GFTEHFPVSQFMRDCRIALIYEGTNGVQALDLVGRKLAAKGGRAVMTFFQEIDQFIGEND 480

Query: 479 AGPELTEFAEPLKAAMDNLDELTAWVIDQAKANPNEIGAASVEYLHVFGYTAYAYMWARM 538
           +   L  F E L      L + T W++     NP+  GAAS +Y+H+FG    AYMWA M
Sbjct: 481 SDEALKPFIEALGGVKAQLQDGTMWLMQNGLQNPDNAGAASTDYMHLFGLAGLAYMWALM 540

Query: 539 AAVAVAKREEGD---FYQSKLGTARFYFARLLPRIHSLSASVKAGSESLYLLDAAQF 592
           A  A AK   G    F+ +KL T R++  R+LP   S  A +K GS +L  L A  F
Sbjct: 541 AKAANAKIAAGSSDPFFTTKLTTGRYFIERILPDAASHLAKLKTGSATLMALPAEAF 597