Pairwise Alignments

Query, 172 a.a., type VI secretion system effector, Hcp1 family from Pseudomonas stutzeri RCH2

Subject, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

 Score =  216 bits (551), Expect = 1e-61
 Identities = 101/170 (59%), Positives = 124/170 (72%)

Query: 1   MPTPAYLSLEGTKQGLITAGTFTEDSVGNIFQEGHEDQILVQAFQHQVIIPRDPQSGQPT 60
           MPTP Y+S+EG  QGLITAG  T DS+G+ F EGHED++LVQ F H V +P DPQSGQP+
Sbjct: 1   MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS 60

Query: 61  GQRVHKPLMITKVFDKSSPLIFNALTSGERLNKCRLEWYRTSSTGTQEHYFTIELEDAVI 120
           GQRVHKP   T   +K+ PL++NAL+SGE+L    L+WYRTS  G QE++FT +LE+A I
Sbjct: 61  GQRVHKPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASI 120

Query: 121 VDVQSRMPNCQDPNMSHFTHLEDVYFTYRKIVWTHEVSGTSGSDDWRTPI 170
           VD+   MP+CQDP  S FT    V  +YRKI W H  +GTSGSDDWR PI
Sbjct: 121 VDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPI 170