Pairwise Alignments

Query, 684 a.a., Rhs element Vgr protein from Pseudomonas stutzeri RCH2

Subject, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  462 bits (1190), Expect = e-134
 Identities = 268/701 (38%), Positives = 398/701 (56%), Gaps = 43/701 (6%)

Query: 10  FTLSLEGIEHDFKVLE-LQGREAISQP---------YRFDLELVSERSDLDLESLLHRPA 59
           +++ +EG+E +  V+    G+E++S           +R+ ++L S  S+L  + ++ + A
Sbjct: 6   YSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRA 65

Query: 60  FLAL---APVGSGIHGLVHQAAQGESGQRLTRYRLTLVPQLAYLAHRINQRIFQHLTVPQ 116
            L L   + +   +HG+V   +QG+ G   T Y+LTLVP L  L+ R N RIFQ  TVP+
Sbjct: 66  ELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPE 125

Query: 117 IIAQVLEEHGIQADAYRFQLGPVIYPAREYCVQYDETDLHFIQRLCEEEGIHYHFQHGAS 176
           I++ +L+E GI   A+  +   V    RE+CVQY E+D+ F+ RL  EEG+ Y F H A 
Sbjct: 126 ILSILLQEMGIHDYAFALKRDCV---QREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAG 182

Query: 177 GHVLVFGDDQTVFARLAATA-YQQDSGLVADQPVIKRFGLRLETRPSHVTRRDYDFEKPR 235
            H L F D     ++L     Y   +G   D P I     R +   S V  +DY F+KP 
Sbjct: 183 KHTLYFSDASDSLSKLPEPIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKKPA 242

Query: 236 LSMEAAFHS---DFQPD-LEDYDYPGRFTERARGKHLSQRALERHRHDYELAEGESDQPQ 291
            S          D+Q    + +D PGR+ +   G   SQ  L+  R     A G+S++P 
Sbjct: 243 YSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPL 302

Query: 292 LASGHFLPLGEHPRSDWNQLWLLTEVLHEGKQPQVLEESVTSDSQSRDGFTQGYRNHFTA 351
           L +G+   L EH     N+ W++  + H+G+QPQ L+E   S + +       Y N F+ 
Sbjct: 303 LRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEEGGSGATT-------YNNQFSL 355

Query: 352 TPWDIPFRPALRHPKPKVLGSQTAVVTGPAGEEIHCDEYGRVRVQFHWDREGQADDKTSC 411
            P  + +R A   PKP+V G   A V GP GEEI CDE+GRV++ F WDR    ++++SC
Sbjct: 356 IPGHLHWR-AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSC 414

Query: 412 WLRVSSSWAGDRYGGIAIPRVGMEVLVTFLEGDPDQPLVTGCLYHKEHQVPYDLPANKTR 471
           W+RVS  WAG +YG IAIPR+G EV+V+FL GDPDQP++TG  YH  +  PY LP +KT+
Sbjct: 415 WVRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTK 474

Query: 472 TVLKTLSSPGGGGYNELRIEDRKGQEQIYIHAQRDWDENIEHDQKVRVGHERHDTVDANS 531
           TVL+T  +  G G+NEL  ED+ G+EQIY+HAQ+D+D  IE+D    + H++H TV+ + 
Sbjct: 475 TVLRT-ETHQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQ 533

Query: 532 YSEYRAEEHRTTHADRKTEIRANDHLTVGNSQQLKIGTGQFVEAGQEIHLSSGLKVVLEA 591
           +++ +  +H T   + +T ++ +    +G S Q KIG+    +AG E+HL +G K+VLEA
Sbjct: 534 FTQIKHNQHLTVEGESRTLVKLDCSSEIGGSLQQKIGSKAIYDAGTEVHLKAGNKLVLEA 593

Query: 592 GSELTFKAGGSFIKLDASGITMVGPLIRMNSGGSPGNGSGAAPIL------------PGQ 639
           G+ELT KAGGSFIK+DA G+ +VG  I +NSGGS G+GSG    +            P +
Sbjct: 594 GNELTIKAGGSFIKVDAGGVHVVGSAINLNSGGSAGSGSGYGGKMAELPQGVDKAKTPQE 653

Query: 640 VKAADADVPGISLEALVKQNML-FRSTRTGVCEVCEAAKAS 679
           ++ A       S+  L+K   +        VCEVCE AK +
Sbjct: 654 IELAAVTPTQQSMSPLLKARQIEALKGPAPVCEVCEEAKGN 694