Pairwise Alignments

Query, 266 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 271 a.a., AraC family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  177 bits (450), Expect = 2e-49
 Identities = 96/247 (38%), Positives = 139/247 (56%), Gaps = 3/247 (1%)

Query: 23  PLFARSESLAERTTTPRHNHPWAQLSYAISGVLRVHTERGRFLAPPQRAILIPPGLLHEV 82
           P+F  S      +  P H HP   L YA SG+LRV  E G++L PP  A+ +  G+ H +
Sbjct: 24  PVFGVSGRYPAGSVVPMHQHPQGHLIYADSGLLRVQAESGQWLVPPTAAVWLRSGVAHSL 83

Query: 83  ISSPQTEMRSLYIDQRVVPWAPAHCQVLAVSPLLRELIRTFGTLPVDYDEQGADGRLAAV 142
                 +   L++ Q V    PA   V+ VSPLLRELI T      +         L A+
Sbjct: 84  AMPVTLQAYGLFVRQDVCARLPAFDCVVHVSPLLRELIITLAQAREENMSAKRMRLLGAL 143

Query: 143 ILDQLRAAPELSYSLPWP---DDARLRGICEALYEQPDLSLSLAQWSERLHISEKTLTRQ 199
           +++++   P L + LPWP    D  +  +C+AL + P    + A+W++RL + +KT  R+
Sbjct: 144 VMEEVLTQPTLPFHLPWPMSETDGPMARLCQALLDDPGDMATAAEWADRLAMGQKTFHRR 203

Query: 200 FQRDTGLSFRAWRQRLRLLSALPLLERGQPVTDVALACGYESTSAFIAAFGQQFGTTPGA 259
           F + TG++F  WRQ+LRL+S+LPLL +G P+T VALA GY+S SA+  AFG+QFG  P A
Sbjct: 204 FLQSTGMTFGKWRQQLRLMSSLPLLMQGMPITQVALASGYDSHSAYTTAFGKQFGKPPSA 263

Query: 260 LARAPRP 266
              A  P
Sbjct: 264 FFPAREP 270