Pairwise Alignments

Query, 232 a.a., Flagellar biosynthesis/type III secretory pathway protein from Pseudomonas stutzeri RCH2

Subject, 270 a.a., flagellar assembly protein FliH from Vibrio cholerae E7946 ATCC 55056

 Score = 79.7 bits (195), Expect = 5e-20
 Identities = 48/195 (24%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 32  FAGDPAALQRAVADGFQEGIDKGYREGLEQGREAGHREGFQRGVEDGKALGLEEGRQQGR 91
           F+ +  AL R  A   QEG + G  EG +QG E G  EGFQ G ++G+  G ++G  +G+
Sbjct: 67  FSEEEIALIRTAAQ--QEGFEAGQAEGYQQGFEQGKAEGFQAGHQEGQTQGYQDGVAEGQ 124

Query: 92  RAFDEAGRPLDRLIEAFEGFRQEYEQARREELLELVQKVARQVIRCELTLHPTQLLTLAE 151
               E  +    L   F            ++L+++V  + ++V+  E+  +P  +L   +
Sbjct: 125 ALIQEQVKTFMALANQFAQPLDLLNAQVEKQLVDMVLALTKEVVHVEVQTNPQVILDTVK 184

Query: 152 EALNAMPGDQEDVRIQLNPEECARIRELAPER---AAAWRLVPDEKLALGECRVLTAQAE 208
            ++ A+P     + ++LNPE+   IR+   E+      W L+ +  L+ G+ ++   ++ 
Sbjct: 185 ASVEALPIAGHAITLKLNPEDVEIIRQAYGEQEIETRNWTLLSEPALSRGDVQIEAGESS 244

Query: 209 ADIGCQQRLDSCMET 223
                ++R+ S +++
Sbjct: 245 VSYRMEERIRSVLKS 259