Pairwise Alignments

Query, 276 a.a., DNA-binding winged-HTH domains from Pseudomonas stutzeri RCH2

Subject, 294 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 4/78 (5%)

Query: 42  DNVEKVDLGFSGSRVLERLLQMPGEVVSREELLSYAWQDR--VVGQGSLNQQIYTLRQVL 99
           D+ E + LG + SR+L  L Q P EV+SR +L  + W+++   V   SL Q I TLR++L
Sbjct: 40  DSEEIIRLGSNESRILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRKML 99

Query: 100 GDA--DSQIIQTLPRRGY 115
            D+    Q ++T+P+RGY
Sbjct: 100 KDSTKSPQYVKTVPKRGY 117