Pairwise Alignments

Query, 396 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

 Score =  198 bits (504), Expect = 2e-55
 Identities = 138/430 (32%), Positives = 206/430 (47%), Gaps = 49/430 (11%)

Query: 5   IALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNFGSLYAE--------TQAMGVEVIGT 56
           ++L+GLSA    LNT  NNIAN+ T GFK SR  FG +Y+         T   GV+    
Sbjct: 4   VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKV 63

Query: 57  TQSISQGGALTSTNRTLDLAISGGGFFVT---RASNGDVGYTRAGIFGTDKDSYITNSLG 113
            Q   +G ++  TN  LDL I+G GFF     R        TR G F  DK+S++  +  
Sbjct: 64  AQQFHEGSSIY-TNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122

Query: 114 QRLQGYPADATGNLQTGTVGDLQLRSGGIPA-----RATDALSFVANLDANQEVPTVA-F 167
           + L GY      N  TG V   + +   IP      + T  +   ANL AN ++   A F
Sbjct: 123 EFLLGYEV----NPDTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALF 178

Query: 168 DPLAADSYNSTYTTKLYDSQGKEHTLTQYFVKTAD--NNWNAHYYV-------------- 211
           D    ++YN T ++ +YDS G+ + LT Y++K  +  N W  +Y V              
Sbjct: 179 DITDPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANTWQTYYTVTDKTGEKPINVVGG 238

Query: 212 DGAALAG-APQALTFDTSGVLAT-PIGTVALAAPLTGGVAPL---------AIQLDYSGT 260
           D A+  G     + F+  G L++   G   +  PL GG  P+          +       
Sbjct: 239 DAASPTGHVGHTMRFNNDGTLSSLNNGQPIVTEPLGGGANPVDLNGADVNQTLSFSLDSA 298

Query: 261 SQYGSEFSVTNNRATGYAAGEQTGMSVEKDGKVYASYSNGERMLQGQVVLASFVNAEGLK 320
           +Q+ + F +T     G   G  T +  +++G V A+YSNG     G+V L    N +GL 
Sbjct: 299 TQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLD 358

Query: 321 NISGTAWTETAASGAAMLGAPGVGQYGTLASGALESSNVDLTQQLVGLMEGQRNYQANTQ 380
              GT W  T  SGA + G    G +G++++G+LE SN+D+TQ+LV L+  QRN+QAN++
Sbjct: 359 KKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSR 418

Query: 381 VISTNKELTQ 390
            +  +  L Q
Sbjct: 419 ALEVHNGLQQ 428