Pairwise Alignments

Query, 242 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

Subject, 262 a.a., flagellar basal-body rod protein FlgG from Vibrio cholerae E7946 ATCC 55056

 Score = 67.4 bits (163), Expect = 3e-16
 Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 27/259 (10%)

Query: 6   YTAMTAASRTMMSLQVRSNNLANVNTPGF---RADLERAQAVAVEGYGYDSRHMALIENN 62
           + + T       ++   SNNLAN +T GF   RA  E      +   G  S     + + 
Sbjct: 6   WVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNTRLPS- 64

Query: 63  GVSLAAGPMVA-------------TGRELDFAVKGTGL--IVLQDGEGEAYTRQGSMQVD 107
           G+ L AG  V              T   LD  ++G G   I++ DG   AY+R G   +D
Sbjct: 65  GLMLGAGSKVVATQKVHTNGNVQTTSNSLDMMIEGDGFFQILMPDGN-IAYSRNGQFTLD 123

Query: 108 AEGRLTLNGRAVLGEGGPIVLPEYDRMEIGNDGTVSVMAPGDWMMAEVDRIRLVDVPAAN 167
            EG +  +G     +   I+  +   + IGNDG VSV   G      + +I  VD     
Sbjct: 124 DEGAIVTSGAGYRLQPEIIIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFINPG 183

Query: 168 LMKNQAGLLVTRDGEPAQPSEDV-------RLASGFLESSNVSAIDELASTMSLNRLFET 220
            ++     L    G   +P E V        +    LE+SNV+  +EL + +   R++E 
Sbjct: 184 GLEPVGQNLYLPTGASGEPQEGVPGLDGLGDIRQSMLETSNVNVTEELVNMIEAQRVYEM 243

Query: 221 QVKMMKAAEDLSDAGNRMI 239
             K++ A + +    N+ +
Sbjct: 244 NSKVISAVDKMMSFVNQQL 262