Pairwise Alignments

Query, 459 a.a., flagellar hook-associated protein FlgK from Pseudomonas stutzeri RCH2

Subject, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

 Score =  123 bits (308), Expect = 2e-32
 Identities = 95/330 (28%), Positives = 155/330 (46%), Gaps = 19/330 (5%)

Query: 2   SVLSQIGYSGVRASQIALTATGQNIANVNTPGFSRL-------APEMHSVGGQTASSIGG 54
           S L  +G   V  +Q  L  TG NI+NVNT G+SR        AP  +  GG+T    G 
Sbjct: 3   SDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQY--GGET---YGM 57

Query: 55  GVQVSSIRRLSNDFQNQQLWRASTDKNYYGTSQQYLTALEGLIHSEGS-SVSVGLDNFFA 113
           GV V ++RR  + F  ++L  ASTD  +   +++ L  L  L+ S  S  +   L+ +F 
Sbjct: 58  GVHVENVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFD 117

Query: 114 ALSEASSTPESIALRQQIIGEAKQLAQRFNGLNGNIGTQLNALQGQRVAMVAEINGLSGN 173
           ++   + +P  +  R+ ++ ++K ++Q  N  +  +  Q +         V  IN L+  
Sbjct: 118 SVKSLADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALE 177

Query: 174 IAELNAEILKMESAGRDTATLRDYRENLIKDLSQYAGIRVQEVADGT-LTVSLANGQPLV 232
           I +L   ++++     D   L D  E L+ +LSQY  + V +   G    + + NG  LV
Sbjct: 178 IRDLQRLMMRVPGPHND---LMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLV 234

Query: 233 AGTTAGQLRVEQNLAGEQE--LTLVFAKTTFPLVQEGLGGSLGALYDMEYGALRPAQADL 290
           +GT A QLRV       Q+  L +V  K    +    +GG + A+ DM    +     ++
Sbjct: 235 SGTEASQLRVIDGFPDTQQHRLAMVEGKALKAISARDIGGKMEAILDMRDEHIPYLMDEV 294

Query: 291 HDMAAALAQMVNDTLAGGFDLNGNPGQPLF 320
             +A + +  VN   + G DL GN G  LF
Sbjct: 295 GRLALSFSHEVNTLQSQGLDLRGNVGSALF 324



 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 355 GNNENLLALLELKSAKVNVAGSDVPLNDAYAGLVGRVGSASRQNKADLAAATVVAEQAQA 414
           G+N NL  ++ +++AK  +  ++  + D Y  L   VG            A +  E AQ+
Sbjct: 521 GDNGNLRKMINIQTAK-RMNDNESTIIDLYHNLNTDVGLKMATMTRLTDVARLEKEAAQS 579

Query: 415 QRDSVSAVNLDEEAVNLMAYEQAYQANMKVISTSNDLFNAVLAM 458
           +  S+S VNLDEEA N+M ++QAY A+ ++I  SND FN +LA+
Sbjct: 580 RIASISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTILAL 623