Pairwise Alignments

Query, 457 a.a., Collagenase and related proteases from Pseudomonas stutzeri RCH2

Subject, 453 a.a., tRNA 5-hydroxyuridine modification protein YegQ from Escherichia coli Nissle 1917

 Score =  741 bits (1914), Expect = 0.0
 Identities = 354/452 (78%), Positives = 404/452 (89%), Gaps = 5/452 (1%)

Query: 5   YRTELLSPAGTLKSMRYAFAYGADAVYAGQPRYSLRVRNNEFDHANLKLGIDEAHALGKQ 64
           ++ ELLSPAGTLK+MRYAFAYGADAVYAGQPRYSLRVRNNEF+H NL+LGI+EAHALGK+
Sbjct: 2   FKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGKK 61

Query: 65  FYVVVNIAPHNAKLKTFIKDLEPVVAMGPDALIMSDPGLIMLVRQHFPQMTIHLSVQANA 124
           FYVVVNIAPHNAKLKTFI+DL+PVV MGPDALIMSDPGLIMLVR+HFP+M IHLSVQANA
Sbjct: 62  FYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQANA 121

Query: 125 VNWATVKFWESQGVSRVILSRELSLEEIGEIREQVPGMELEVFVHGALCMAYSGRCLLSG 184
           VNWATVKFW+  G++RVILSRELSLEEI EIR QVP ME+E+FVHGALCMAYSGRCLLSG
Sbjct: 122 VNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDMEIEIFVHGALCMAYSGRCLLSG 181

Query: 185 YINKRDPNQGSCTNACRWEYKTHEAKENEIGDIVHKYEPIAVQPAEPVRSEPTLGVGAPT 244
           YINKRDPNQG+CTNACRWEY   E KE+++G+IVHKYEPI VQ       EPTLG+GAPT
Sbjct: 182 YINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKYEPIPVQ-----NVEPTLGIGAPT 236

Query: 245 DEVFLLEDSSRPGEFMSAFEDEHGTYIMNSKDLRAVQHVERLVQMGVHSLKIEGRTKSHY 304
           D+VF++E++ RPGE+M+AFEDEHGTYIMNSKDLRA+ HVERL +MGVHSLKIEGRTKS Y
Sbjct: 237 DKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFY 296

Query: 305 YVARTAQVYRKAIDDALAGRPFDKSLMDTLESLAHRGYTEGFLRRHVHDEYQNYERGFSL 364
           Y ARTAQVYRKAIDDA AG+PFD SL++TLE LAHRGYTEGFLRRH HD+YQNYE G+S+
Sbjct: 297 YCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSV 356

Query: 365 SERQQFVGELTGERRNGLAEVTVKNRFAVGDKLELMTPQGNLNLRLEQLENKRGEAIEVA 424
           S+RQQFVGE TGER+  LA V VKN+F+VGD LELMTPQGN+N  LE +EN +GEA+ VA
Sbjct: 357 SDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELMTPQGNINFTLEHMENAKGEAMPVA 416

Query: 425 PGDGHTVYLAVPEDVDLRYALLMRELEGSTTR 456
           PGDG+TV+L VP+D++L YALLMR   G TTR
Sbjct: 417 PGDGYTVWLPVPQDLELNYALLMRNFSGETTR 448