Pairwise Alignments

Query, 370 a.a., recF protein from Pseudomonas stutzeri RCH2

Subject, 359 a.a., DNA replication/repair protein RecF from Rhodanobacter denitrificans FW104-10B01

 Score =  215 bits (547), Expect = 2e-60
 Identities = 139/364 (38%), Positives = 194/364 (53%), Gaps = 8/364 (2%)

Query: 1   MSLSRLSVTGVRNLHPVTLSPCPRINILFGDNGSGKTSLLEAIHLLGLARSFRSIRLNPV 60
           M L +L + G+R L  V     P IN+  G NG+GKTS+LEA  LL  ARSFRS     +
Sbjct: 1   MRLQQLRIRGLRCLTDVDAVLGPAINVFVGANGAGKTSVLEAAFLLSHARSFRSGAKEAL 60

Query: 61  ITYEQSACTVFGQVELPDQHSRALGVARDRSGEVRIRIDGQSVRSAAELADTLPLQLINP 120
           +    +  ++F ++   D+    LG+ R  +G    ++DG  V    +L     +    P
Sbjct: 61  LQRGATQLSIFAELCHADRRVCRLGLGRAGAGW-EAKLDGSGV-PLGQLVSECAVVCFEP 118

Query: 121 DSFRLLEGAPKLRRQFLDWGVFHVEHRFMAAWQRLQQALRQRNSWLRHGTLDGASN-AAW 179
            S  L+ GA + RR++LDWGVFHVEH F++ W+R Q+AL+QRNS LR  +  G    A W
Sbjct: 119 GSHALIAGAAEERRRYLDWGVFHVEHAFLSCWRRYQRALKQRNSLLRSLSPPGDELFAPW 178

Query: 180 SRELTLASDEIDGYRRAYIQALKPVFETTLAVLL-DLDGLKLSYYRGWDKDRPLADVLAT 238
             EL  A+D+ID  RRAY+  L+P  + ++A LL +L    L Y RGW  +  LA  L  
Sbjct: 179 EAELAQAADQIDRQRRAYLDRLRPRLQGSIAGLLPELGAFALRYRRGWSDELDLARQLRE 238

Query: 239 SLERDRALGHTQSGPQRADLRLKVGNHNAAEVLSRGQQKLVVCALRIAQGHLVSEAKRGQ 298
              RD A GHT  G  RAD  +        E LSRGQ+KL   A  +AQ  L +E +   
Sbjct: 239 QRGRDLARGHTTLGAHRADWSITFEQAPLREHLSRGQEKLTALACLLAQAELYAEHRGEW 298

Query: 299 CIYLVDDLPSELDAQHRQALCKLLEQLGCQVFITCVDSTVLQEGWHEQTPVSMFHVEHGQ 358
            I  +DDL SELD  H+ A+  LL     QV +T  +     +G     P  +FHVE G+
Sbjct: 299 PIVCLDDLASELDQAHQLAVVTLLRAADTQVLLTGTELPAALQG----LPACVFHVEQGR 354

Query: 359 ITQV 362
           + ++
Sbjct: 355 LARL 358