Pairwise Alignments

Query, 370 a.a., recF protein from Pseudomonas stutzeri RCH2

Subject, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (711), Expect = 2e-79
 Identities = 155/365 (42%), Positives = 212/365 (58%), Gaps = 7/365 (1%)

Query: 1   MSLSRLSVTGVRNLHPVTLSPCPRINILFGDNGSGKTSLLEAIHLLGLARSFRSIRLNPV 60
           M LSRL +   RN+    +      N L G NGSGKTS+LEAI+LLG  RSF+S     +
Sbjct: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60

Query: 61  ITYEQSACTVFGQV----ELPDQHSRALGVARDRSGEVRIRIDGQSVRSAAELADTLPLQ 116
           I  E S   V G++       DQ    +G+ + R G   ++I GQ+ +  A+LA  LPLQ
Sbjct: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120

Query: 117 LINPDSFRLLEGAPKLRRQFLDWGVFHVEHRFMAAWQRLQQALRQRNSWLRHGTLDGASN 176
           LI+P+ F LL   PK RR F+DWGVFH E  F  AW R ++  +QRN+ L+         
Sbjct: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQ-SYREL 179

Query: 177 AAWSRELTLASDEIDGYRRAYIQALKPVFETTLAVLLDLDGLKLSYYRGWDKDRPLADVL 236
           + W +EL   +++ID +R +Y+  LK V E      L    + L YYRGW+KD+P   +L
Sbjct: 180 SYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSIL 239

Query: 237 ATSLERDRALGHTQSGPQRADLRLKVGNHNAAEVLSRGQQKLVVCALRIAQGHLVSEAKR 296
             + ERD+ LG+T SGP +ADLR+KV      +VLSRGQ KL+VCALR+AQG  ++E   
Sbjct: 240 EKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELTG 299

Query: 297 GQCIYLVDDLPSELDAQHRQALCKLLEQLGCQVFITCVDSTVLQEGWHEQTPVSMFHVEH 356
            QCIYL+DD  SELD+  RQ L   L+  G QVF++ +  + + +   E +    FHV H
Sbjct: 300 KQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESS--KTFHVAH 357

Query: 357 GQITQ 361
           G I Q
Sbjct: 358 GVIEQ 362