Pairwise Alignments

Query, 370 a.a., recF protein from Pseudomonas stutzeri RCH2

Subject, 387 a.a., DNA replication and repair protein recF from Caulobacter crescentus NA1000

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 105/366 (28%), Positives = 159/366 (43%), Gaps = 36/366 (9%)

Query: 2   SLSRLSVTGVRNLHPVTLSPCPRINILFGDNGSGKTSLLEAIHLLGLARSFRSIRLNPV- 60
           +L  L++   R+     L    R   LFG NG+GKT+LLEAI LL   +  R + L  V 
Sbjct: 5   ALLSLTLADFRSYERARLETGGRSVYLFGANGAGKTNLLEAISLLSPGKGLRGVSLAEVG 64

Query: 61  --ITYEQ--SACTVFGQVELPDQHSRALGVARDRSGEVR--IRIDGQSVRSAAELADTLP 114
             +  E    A  V  +V+  +     +G   ++ G  R  +R++G++V     LAD + 
Sbjct: 65  RRLPGEAVGRAWAVAAEVQSGEDAPVRIGTGVEQGGAARRTVRLEGETV-PPGRLADHVR 123

Query: 115 LQLINPDSFRLLEGAPKLRRQFLDWGVFHVEHRFMAAWQRLQQALRQRNSWLRHGTLDGA 174
              + P   RL   A   RR+F D  VF  E    A      +A R+R   L      GA
Sbjct: 124 PIWLTPAQDRLFLEAASERRRFFDRLVFAGEPAHAANANGYDKAQRERMRLLVDAAETGA 183

Query: 175 -SNAAWSRELTLASDEIDGYRRAYIQALKPVFETTLAVLLDLDG--------LKLSYYRG 225
            ++AAW   LT     +  +     QA      T LA+  ++DG         +L     
Sbjct: 184 PADAAW---LTALEARLAEFGALLAQARA---RTLLALQAEIDGRGDRPFPLARLGLTGE 237

Query: 226 WDK-----------DRPLADVLATSLERDRALGHTQSGPQRADLRL-KVGNHNAAEVLSR 273
           W++           +  LA  LA++  RD A G   +GP R DL +  V     A   S 
Sbjct: 238 WERMALEGAPFAEIELKLAQALASARARDGAAGRALTGPHRGDLAIFHVEKDRPAAECST 297

Query: 274 GQQKLVVCALRIAQGHLVSEAKRG-QCIYLVDDLPSELDAQHRQALCKLLEQLGCQVFIT 332
           G+QK ++  L +AQ   +S A+     + L+D++ + LD   R AL   L  L  Q F+T
Sbjct: 298 GEQKALILNLVLAQAARLSRAESAPNPVILLDEVAAHLDLTRRAALADELTALKLQAFLT 357

Query: 333 CVDSTV 338
             D ++
Sbjct: 358 GTDESL 363