Pairwise Alignments

Query, 830 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 642 a.a., PAS-family sensor histidine kinase from Caulobacter crescentus NA1000

 Score =  160 bits (404), Expect = 3e-43
 Identities = 116/389 (29%), Positives = 192/389 (49%), Gaps = 30/389 (7%)

Query: 455 ESERWEAQRRLELVLESATESLWEYDIPNHTLRVRGSMLGRFGLPTG---QLSDREFRQR 511
           E+ R +A+R  EL+  +A   +W ++ P   +      +     P G    ++  E  Q 
Sbjct: 127 EAARLQAERSNELLRNAAGVYVWRFN-PRRGVYAFDQDIPTPSAPEGGARTMTVAEMTQS 185

Query: 512 IHPDDLPQAVAQVERIQQGLQQRYEAEYRFADALGEYHWL---LSRGRVLEQDPETGMAR 568
           IHP+D  +      R  Q   +  E +YR+ D  G   W+   ++   V    P+T    
Sbjct: 186 IHPEDSARVWQAFSRTLQ-TGEHVEIDYRYLDP-GADDWIHLHVAWRGVRGSSPDT---- 239

Query: 569 VLAGTHVDIDALKRVEAELRAATLQAQAASEAKGRLLSGISHELRTPLNAILGFAQLMRM 628
                  D+  + +   EL AA   A AA+E K + L+ +SHE+RTP+N +LG   L++ 
Sbjct: 240 ------YDVIGITQNVTELVAARDAALAAAETKSQFLANMSHEIRTPMNGVLGVLHLLKT 293

Query: 629 DCDDSSQSEAAEYLDEILLASRHLNQLLGEILEWSSLQKERPQLELQPVDVCSLMRECAE 688
           +       +    L E L     L+ LL +I+++S ++  + +L  +PV    L+R  A+
Sbjct: 294 E---KLSDDGRRLLTEALSCGEMLSALLNDIIDFSKIEAGKLELSAEPVCPAELLRGVAD 350

Query: 689 LIALEVQQRGLQLDLSLPDDGLLVLAEPRRLRQVLLNLLSNAMKYNVPNG---HISLRAE 745
           ++  + + +GL L +   DD   V  +P RLRQ L NL+ NA+K+ +  G    +S R  
Sbjct: 351 MLRAQAETKGLYLRVEASDDLGWVATDPLRLRQALFNLIGNAVKFTLEGGVVARLSGRRI 410

Query: 746 TSPG----HVRILVEDTGLGIDQAQQAQVFEPF-QRLGRENSMIQGTGIGLSLCLEFARL 800
            SP      +R  ++DTG+GI +   A++FE F Q  G       G+G+GL++C   A L
Sbjct: 411 DSPDGARLRLRFEIDDTGVGIGEEAGARLFERFRQGDGSTTRRFGGSGLGLAICRRLAEL 470

Query: 801 MNGQLGLHSEPGVGSRFWIELPRVAPLQP 829
           M G++G  S+ G GS FW+E+   A  +P
Sbjct: 471 MGGEVGFESQLGKGSTFWLEVETQACARP 499