Pairwise Alignments

Query, 830 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 900 a.a., PAS-family sensor histidine kinase from Caulobacter crescentus NA1000

 Score =  172 bits (435), Expect = 1e-46
 Identities = 132/426 (30%), Positives = 215/426 (50%), Gaps = 36/426 (8%)

Query: 424 RWRPEPVRAQIRELDEMSRHTQDIGSRLSHSESERWEAQRRLELVLESATESLWEYDIPN 483
           RW   P R    E+  +  +  +I + L+ +  E     RRL++ L +A   ++E D   
Sbjct: 352 RWEARPWRDVAGEIVGVITYMDEI-TALTEARREARNNARRLKVALGAARAGVYEIDHEK 410

Query: 484 HTLRVRGS-----MLGRFGLPTGQLSDREFRQRI----HPDDLPQAVAQVERIQ-QGLQQ 533
                 GS     M+GR      ++  ++ R+ I    HP+DL Q        + +G + 
Sbjct: 411 QAFW--GSPEFHRMMGR------RIEYQDVREGIWPMVHPEDLTQLYETAATWRREGRRT 462

Query: 534 RYEAEYRFADALGEYHWLLSRGRVLEQDPETGMARVL--AGTHVDIDALKRVEAELRAAT 591
             E E R     GE  W     RV  +    G  + L   G  +DID  K+ E  L  A 
Sbjct: 463 PQEHEVRLLSPGGEARW----ARVFHEVRRDGQGKALKAVGLILDIDEKKKAELALIEAE 518

Query: 592 LQAQAASEAKGRLLSGISHELRTPLNAILGFAQLMRMDCDDSSQSEAAEYLDEILLASRH 651
             AQAA+EAK + L+ +SHE+RTP+N +LG   +++ +       ++A  L+E L A + 
Sbjct: 519 RAAQAANEAKAQFLANMSHEIRTPMNGVLGVMHVLKRELPPG---DSASLLNEALAAGQM 575

Query: 652 LNQLLGEILEWSSLQKERPQLELQPVDVCSLMRECAELIALEVQQRGLQLDLSLPDDGLL 711
           L+ LL ++++ S ++  R  L  +PVD   L+R  A L+A +   +GL+L+L LPDD   
Sbjct: 576 LSTLLDDVIDISRIEAGRLDLNHEPVDPRDLVRGVARLLATQAAHKGLRLELDLPDDLGW 635

Query: 712 VLAEPRRLRQVLLNLLSNAMKYNVPNGHISLRAE---TSPGHVRIL-VEDTGLGIDQAQQ 767
           +  +P R+RQ L NL+ NA+K+ +  G +++RA+   T  G   +  + DTG+G+    Q
Sbjct: 636 IETDPTRVRQALFNLIGNAVKFTL-KGSVTVRAQRRITDAGPYLVFDIIDTGVGVPLEAQ 694

Query: 768 AQVFEPFQRLGRENS-MIQGTGIGLSLCLEFARLMNGQLGLHSEPGVGSRF--WIELPRV 824
            ++FE FQ+     +    G+G+GL++  + AR++ G++   S PG GS F   I  P V
Sbjct: 695 KRLFERFQQADAGTTRRFGGSGLGLAITRKLARMLGGEVSFRSVPGEGSTFSLTIAAPPV 754

Query: 825 APLQPQ 830
            P   Q
Sbjct: 755 GPPSAQ 760